RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 C4orf46Q504U0 113 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 PPP6R3Q5H9R7 873 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 EGFLAMQ63HQ2 1017 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 NIPAL1Q6NVV3 410 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 ACAD11Q709F0 780 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 TMC3Q7Z5M5 1100 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 METTL25Q8N6Q8 603 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 SLC22A8Q8TCC7 542 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 ATL1Q8WXF7 558 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CFAP57Q96MR6 1250 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CYTH2Q99418 400 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 DHRS9Q9BPW9 319 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 OSBPL8Q9BZF1 889 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 WASH6PQ9NQA3 447 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 PARVAQ9NVD7 372 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 RRN3Q9NYV6 651 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 ZSWIM8A7E2V4 1837 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 ZNF638Q14966 1978 aaKnown RBP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 SYCE1LA8MT33 242 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 H3BSA7 217 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 KIAA0391O15091 583 aaKnown RBP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 MICAL2O94851 1124 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 BAG2O95816 211 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CLPTM1O96005 669 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 TFAP2AP05549 437 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 IL1R2P27930 398 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 HADHAP40939 763 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 GAD2Q05329 585 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 PTPN11Q06124 597 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CALCOCO2Q13137 446 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 MED21Q13503 144 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 DSC3Q14574 896 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CYP2A13Q16696 494 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 KYNUQ16719 465 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 LRRC36Q1X8D7 754 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CCDC14Q49A88 953 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 ZNF484Q5JVG2 852 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 PPP1R26Q5T8A7 1209 aaPredicted RBP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 NPNTQ6UXI9 565 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 ELMOD2Q8IZ81 293 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CPSF7Q8N684 471 aaKnown RBP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 SLC4A11Q8NBS3 891 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CCDC77Q9BR77 488 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 STX18Q9P2W9 335 aaKnown RBP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 TSPAN16Q9UKR8 245 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 GABRQQ9UN88 632 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 TNFSF13BQ9Y275 285 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.69□□□□□ -1.5
CPNE4-214ENST00000617767 CHD7Q9P2D1 2997 aa5.69□□□□□ -1.5
CPNE4-214ENST00000617767 SGK1O00141 431 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CLDN5O00501 218 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 NDC80O14777 642 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 ZC3H11AO75152 810 aaKnown RBP eCLIP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 RNASEH2AO75792 299 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 TFE3P19532 575 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PROZP22891 400 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MMP8P22894 467 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 HOXA11P31270 313 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 KRT20P35900 424 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 ITGA8P53708 1063 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MLLT6P55198 1093 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 IFITM2Q01629 132 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CDC16Q13042 620 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MRPL28Q13084 256 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CUL1Q13616 776 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MFSD10Q14728 455 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SIX1Q15475 284 aaPredicted RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 FAM110CQ1W6H9 321 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 GOLGA7BQ2TAP0 167 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 INPP5DQ92835 1189 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 OSBPL6Q9BZF3 934 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SLITRK6Q9H5Y7 841 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MRPL47Q9HD33 250 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 HPS4Q9NQG7 708 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 ZNF212Q9UDV6 495 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 VANGL2Q9ULK5 521 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 DMTF1Q9Y222 760 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 INPP5FQ9Y2H2 1132 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 IFT52Q9Y366 437 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 ARHGAP10A1A4S6 786 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 A8MXQ7 604 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 ATP5HO75947 161 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 FKBP9O95302 570 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PRLP01236 227 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 EIF2S1P05198 315 aaKnown RBP5.68□□□□□ -1.5
CPNE4-214ENST00000617767 SMIM18P0DKX4 95 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CYP3A5P20815 502 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PTGIRP43119 386 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 CBX5P45973 191 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 P2RX3P56373 397 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 HTRA3P83110 453 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PTP4A2Q12974 167 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 MOGQ16653 247 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 FAXCQ5TGI0 409 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 DUPD1Q68J44 220 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 PPP4R4Q6NUP7 873 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 ZDHHC24Q6UX98 284 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 GLRX5Q86SX6 157 aa5.68□□□□□ -1.5
CPNE4-214ENST00000617767 METTL3Q86U44 580 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms