RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SLC8B1Q6J4K2 584 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 TFAP2DQ7Z6R9 452 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 DNAAF3Q8N9W5 541 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 CASS4Q9NQ75 786 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 PCDH10Q9P2E7 1040 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 KIAA0754O94854 1291 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 PAPOLAP51003 745 aaKnown RBP17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 SLC18A2Q05940 514 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 FAM117BQ6P1L5 589 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 CCNJLQ8IV13 435 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 ATP6V0D2Q8N8Y2 350 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 NOL6Q9H6R4 1146 aaKnown RBP17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 IL1RAPL1Q9NZN1 696 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 ERI2A8K979 691 aaKnown RBP17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 WASH4PA8MWX3 477 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 MATN3O15232 486 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 SNX3O60493 162 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 LPXNO60711 386 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 CNTN5O94779 1100 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 ALFQ53S48 1182 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 SPOUT1Q5T280 376 aaKnown RBP17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 RNF187Q5TA31 235 aaPredicted RBP17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 RAP1GAP2Q684P5 730 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 KIAA1841Q6NSI8 718 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 CYS1Q717R9 158 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 RNF168Q8IYW5 571 aaPredicted RBP17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 PLCD3Q8N3E9 789 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 SPATA22Q8NHS9 363 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 APOPT1Q96IL0 206 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 BTN2A3PQ96KV6 586 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 IL12RB2Q99665 862 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 NAT9Q9BTE0 207 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 COMMD8Q9NX08 183 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 ATXN2Q99700 1313 aaKnown RBP17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 TLR5O60602 858 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZDHHC11BP0C7U3 371 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 CORO7P57737 925 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 NIPAL4Q0D2K0 466 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 DNAJC3Q13217 504 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 PRPSAP1Q14558 356 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 SEPT7Q16181 437 aaKnown RBP17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 PDK4Q16654 411 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 CERCAMQ5T4B2 595 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 LGSNQ5TDP6 509 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 FAM47EQ6ZV65 393 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 TTC17Q96AE7 1141 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 FCRL3Q96P31 734 aaPredicted RBP17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 BFARQ9NZS9 450 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 RPS6KL1Q9Y6S9 549 aa17.71■□□□□ 0.43
PCDHGC3-205ENST00000617641 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 HMX2A2RU54 273 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 TM9SF1O15321 606 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 KRT38O76015 456 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 OAS1P00973 400 aaKnown RBP17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 IGLV3-27P01718 113 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 POLBP06746 335 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 NEK3P51956 506 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 MROH9Q5TGP6 573 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 C1orf53Q5VUE5 145 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 CGB2Q6NT52 195 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 FBXL22Q6P050 247 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 IGSF8Q969P0 613 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 CLSTN3Q9BQT9 956 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 TTLL2Q9BWV7 592 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZYG11BQ9C0D3 744 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 LRRC40Q9H9A6 602 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 DOCK4Q8N1I0 1966 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 ATP9BO43861 1147 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 CACNG3O60359 315 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 RFPL1O75677 317 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 MT-CYBP00156 380 aaPredicted RBP17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 RHOQP17081 205 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 TPH1P17752 444 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 MARK2Q7KZI7 788 aaKnown RBP17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 OTUD6BQ8N6M0 293 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 ANKS4BQ8N8V4 417 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 UBE2OQ9C0C9 1292 aaKnown RBP17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 GLOD4Q9HC38 313 aa17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 IPO11Q9UI26 975 aaKnown RBP17.7■□□□□ 0.42
PCDHGC3-205ENST00000617641 WDR91A4D1P6 747 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 MYO1CO00159 1063 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 SEC24AO95486 1093 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 HLA-DQB2P05538 268 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 CLTBP09497 229 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 ERVK-10P10266 1014 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 DEFB103AP81534 67 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 ITIH4Q14624 930 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 CIR1Q86X95 450 aaPredicted RBP17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF669Q96BR6 464 aaPredicted RBP17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 HMCESQ96FZ2 354 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 TMEM248Q9NWD8 314 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 PPARGC1AQ9UBK2 798 aaKnown RBP17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 PSAT1Q9Y617 370 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 IGLV3-10A0A075B6K4 115 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 SERPINB9P50453 376 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 SPANXN3Q5MJ09 141 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 TIGD7Q6NT04 549 aaPredicted RBP17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 YTHDF3Q7Z739 585 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms