RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TRIM39Q9HCM9 518 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ENTPD7Q9NQZ7 604 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ABI2Q9NYB9 513 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 VAV3Q9UKW4 847 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 BAZ2BQ9UIF8 2168 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 RBAK-RBAKDNI3L0D1 243 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 CYB561D2O14569 222 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 CCNT2O60583 730 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 SEC22BO75396 215 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 ATP5F1P24539 256 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TKTL1P51854 596 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 YWHAZP63104 245 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 PIWIL4Q7Z3Z4 852 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 C11orf96Q7Z7L8 435 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 MAP4K3Q8IVH8 894 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 AADATQ8N5Z0 425 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 EFCAB3Q8N7B9 438 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 DNAJC19Q96DA6 116 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 CELF6Q96J87 481 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 WDR12Q9GZL7 423 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 EPB41L1Q9H4G0 881 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 A0A1W2PPM1 405 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 AGPSO00116 658 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TRMUO75648 421 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TM7SF2O76062 418 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 MICAL2O94851 1124 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 SERPINF2P08697 491 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 CXCL8P10145 99 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 EPB42P16452 691 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 OXCT1P55809 520 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 KIAA0408Q6ZU52 694 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 IKBIPQ70UQ0 350 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 DDX53Q86TM3 631 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 MIB1Q86YT6 1006 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 FBXO30Q8TB52 745 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 ELMO3Q96BJ8 720 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TPD52L3Q96J77 140 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 ADGRE3Q9BY15 652 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 ITGA11Q9UKX5 1188 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 A0A0A0MRY4 1105 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 SIGLEC16A6NMB1 481 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 IRF1P10914 325 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 S100A3P33764 101 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 GABRB2P47870 512 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 CASP5P51878 434 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TRAP1Q12931 704 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TDRD10Q5VZ19 366 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 LPCAT4Q643R3 524 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 ATG14Q6ZNE5 492 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 BBS12Q6ZW61 710 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 BRSK2Q8IWQ3 736 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 CERS2Q96G23 380 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 SPATA13Q96N96 652 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 PDCD2LQ9BRP1 358 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 IL22Q9GZX6 179 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 PCDHA11Q9Y5I1 949 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 H3BN98 237 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 MAGEC1O60732 1142 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TSPAN19P0C672 248 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 IL12AP29459 219 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 CAPZA2P47755 286 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 SLC6A3Q01959 620 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 PHKG1Q16816 387 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 MILR1Q7Z6M3 343 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 LZTR1Q8N653 840 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 SHC3Q92529 594 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TBCDQ9BTW9 1192 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 TMEM109Q9BVC6 243 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 DENND2DQ9H6A0 471 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 MAN1C1Q9NR34 630 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 ARHGEF3Q9NR81 526 aa10.83□□□□□ -0.68
CLTCL1-209ENST00000617103 E9PCH4 1651 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 DHRS12A0PJE2 317 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 USP12O75317 370 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 B3GAT3O94766 335 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 ASS1P00966 412 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 PABPC1P11940 636 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 PPP2R1BP30154 601 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 GRIA4P48058 902 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 LSM3P62310 102 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 CDH18Q13634 790 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 NEPROQ6NW34 567 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 ZPBP2Q6X784 338 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 UNC5AQ6ZN44 842 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 FAM47BQ8NA70 645 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 ACE2Q9BYF1 805 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 NMUR2Q9GZQ4 415 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 TMEM39BQ9GZU3 492 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SH3BP4Q9P0V3 963 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 DKK3Q9UBP4 350 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 LEF1Q9UJU2 399 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 NUDT5Q9UKK9 219 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 PADI4Q9UM07 663 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 GSTK1Q9Y2Q3 226 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 CD163L1Q9NR16 1453 aa10.82□□□□□ -0.68
CLTCL1-209ENST00000617103 SLIT1O75093 1534 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms