RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 NOS3P29474 1203 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 IRF8Q02556 426 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 CRY1Q16526 586 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 SAMD4BQ5PRF9 694 aaKnown RBP18.01■□□□□ 0.47
ATXN2-227ENST00000616825 TRAPPC5Q8IUR0 188 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 COPS5Q92905 334 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 IL1RAPL1Q9NZN1 696 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 ARHGAP28Q9P2N2 729 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 FAM50BQ9Y247 325 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 UBIAD1Q9Y5Z9 338 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 SLIT1O75093 1534 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 PIGNO95427 931 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 GTF2E2P29084 291 aaKnown RBP18.01■□□□□ 0.47
ATXN2-227ENST00000616825 FMO4P31512 558 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 CASP5P51878 434 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 THOP1P52888 689 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 NAGLUP54802 743 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 STK32CQ86UX6 486 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 CACUL1Q86Y37 369 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 SLC9A9Q8IVB4 645 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 RNF148Q8N7C7 305 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 HGH1Q9BTY7 390 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 FAM126AQ9BYI3 521 aaPredicted RBP18.01■□□□□ 0.47
ATXN2-227ENST00000616825 DDX20Q9UHI6 824 aaKnown RBP18.01■□□□□ 0.47
ATXN2-227ENST00000616825 KLHL20Q9Y2M5 609 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 LINC00854A0A1B0GVQ3 168 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 CCDC154A6NI56 674 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 PLSCR1O15162 318 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 CLOCKO15516 846 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 ZNF143P52747 638 aaPredicted RBP18.01■□□□□ 0.47
ATXN2-227ENST00000616825 SHROOM1Q2M3G4 852 aaPredicted RBP18.01■□□□□ 0.47
ATXN2-227ENST00000616825 C15orf52Q6ZUT6 534 aaKnown RBP18.01■□□□□ 0.47
ATXN2-227ENST00000616825 EID3Q8N140 333 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 STAG3L4Q8TBR4 150 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 CDT1Q9H211 546 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 HES2Q9Y543 173 aa18.01■□□□□ 0.47
ATXN2-227ENST00000616825 HDCP19113 662 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 PCID2Q5JVF3 399 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 IRAK1BP1Q5VVH5 260 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 CCDC149Q6ZUS6 474 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 SNX32Q86XE0 403 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 STARD8Q92502 1023 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 SHC3Q92529 594 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 TMEM79Q9BSE2 394 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 NLNQ9BYT8 704 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 CAMSAP1Q5T5Y3 1602 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 RGS14O43566 566 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 DGKAP23743 735 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 CHKAP35790 457 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 MAPK8P45983 427 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 FRG1Q14331 258 aaKnown RBP18■□□□□ 0.47
ATXN2-227ENST00000616825 FNDC3BQ53EP0 1204 aaKnown RBP18■□□□□ 0.47
ATXN2-227ENST00000616825 MAGEC3Q8TD91 643 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 SEMA4DQ92854 862 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 ZNF558Q96NG5 402 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 MRPL17Q9NRX2 175 aaKnown RBP18■□□□□ 0.47
ATXN2-227ENST00000616825 RNF19AQ9NV58 838 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 ETNK2Q9NVF9 386 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 ZMYM5Q9UJ78 669 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 PSME2Q9UL46 239 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 NWD1Q149M9 1564 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 PSEN1P49768 467 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 WASHC2DQ5SRD0 308 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 TPGS1Q6ZTW0 290 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 TMEM26Q6ZUK4 368 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 C18orf25Q96B23 403 aaPredicted RBP18■□□□□ 0.47
ATXN2-227ENST00000616825 RNF145Q96MT1 663 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 BTBD10Q9BSF8 475 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 OSBPL6Q9BZF3 934 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 ADPRHL2Q9NX46 363 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 CDH9Q9ULB4 789 aa18■□□□□ 0.47
ATXN2-227ENST00000616825 GUCY1B2O75343 617 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 SMNDC1O75940 238 aaKnown RBP eCLIP17.99■□□□□ 0.47
ATXN2-227ENST00000616825 DLGAP3O95886 979 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 ZSCAN5DPP0CG00 497 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 PAX3P23760 479 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 DLG4P78352 724 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 MAMLD1Q13495 774 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 TRAF7Q6Q0C0 670 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 ZNF621Q6ZSS3 439 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 ZCCHC23Q6ZST2 131 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 C16orf59Q7L2K0 433 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 PALB2Q86YC2 1186 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 LRRC49Q8IUZ0 686 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 FAM71AQ8IYT1 594 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 USP6NLQ92738 828 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 UGT2B28Q9BY64 529 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 AGLP35573 1532 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 SF3B1O75533 1304 aaKnown RBP eCLIP17.99■□□□□ 0.473e-6■■■■■ 94.5
ATXN2-227ENST00000616825 SLC15A5A6NIM6 579 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 HSPA14Q0VDF9 509 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 TRIM71Q2Q1W2 868 aaKnown RBP17.99■□□□□ 0.47
ATXN2-227ENST00000616825 HDDC2Q7Z4H3 204 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 ANKRD52Q8NB46 1076 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 QRFPRQ96P65 431 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 MLPHQ9BV36 600 aaPredicted RBP17.99■□□□□ 0.47
ATXN2-227ENST00000616825 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 ACP6Q9NPH0 428 aa17.99■□□□□ 0.47
ATXN2-227ENST00000616825 MRPL42Q9Y6G3 142 aaKnown RBP17.99■□□□□ 0.47
ATXN2-227ENST00000616825 DCCP43146 1447 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms