RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 TCEA3O75764 348 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 GLP2RO95838 553 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 MT-CO1P00395 513 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 KRT80Q6KB66 452 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 LRRC8BQ6P9F7 803 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 ECHDC2Q86YB7 292 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TNS4Q8IZW8 715 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 NUP93Q8N1F7 819 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 DQX1Q8TE96 717 aaKnown RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 RMDN2Q96LZ7 410 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 PRKD2Q9BZL6 878 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 MRPL40Q9NQ50 206 aaKnown RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 OLA1Q9NTK5 396 aaKnown RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 KCNK4Q9NYG8 393 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 CNTN3Q9P232 1028 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 CASQ2O14958 399 aaPredicted RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 GSTA4O15217 222 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 CKMP06732 381 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 FOXN2P32314 431 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 MAXP61244 160 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRIP10Q15642 601 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 MSS51Q4VC12 460 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TEX44Q53QW1 395 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 PTRHD1Q6GMV3 140 aaKnown RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TMPRSS6Q8IU80 811 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 ZNF567Q8N184 647 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 ZBTB18Q99592 522 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 LATS2Q9NRM7 1088 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 THSD7AQ9UPZ6 1657 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 BUD23O43709 281 aaKnown RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 SRP72O76094 671 aaKnown RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 LRIG2O94898 1065 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 RTN3O95197 1032 aaPredicted RBP13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 NAGLUP54802 743 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 NCALDP61601 193 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 IMPG1Q17R60 797 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TIGD5Q53EQ6 642 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 CLEC20AQ6ZU45 233 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 CARNMT1Q8N4J0 409 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 ATAD1Q8NBU5 361 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 SDCCAG3Q96C92 435 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TBC1D10AQ9BXI6 508 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TCF7L2Q9NQB0 619 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 CD274Q9NZQ7 290 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 BAG5Q9UL15 447 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRPC5OSA6NMA1 111 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 ASMTLO95671 621 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 PROZP22891 400 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 PLK1P53350 603 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 AIF1P55008 147 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 CRHR2Q13324 411 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 INTS6LQ5JSJ4 861 aaKnown RBP13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 C16orf89Q6UX73 402 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 AAASQ9NRG9 546 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 FZD10Q9ULW2 581 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 PKP3Q9Y446 797 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 DPYSL4O14531 572 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 ANGPT2O15123 496 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 SEPT4O43236 478 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 DNAJC6O75061 913 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 H2AFYO75367 372 aaKnown RBP13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 GRIA1P42261 906 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 CDK7P50613 346 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 PIGWQ7Z7B1 504 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 TMEM174Q8WUU8 243 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 PHACTR1Q9C0D0 580 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 VRTNQ9H8Y1 702 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 ATP13A1Q9HD20 1204 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 VPS28Q9UK41 221 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 PLLPQ9Y342 182 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 CLUHO75153 1309 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 GNGT2O14610 69 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 DCXO43602 365 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 RBP1P09455 135 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 THRAP10827 490 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 MLNP12872 115 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 CD86P42081 329 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 KPNA1P52294 538 aaPredicted RBP13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 CTBP1Q13363 440 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 OTOP3Q7RTS5 596 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 SETD3Q86TU7 594 aaPredicted RBP13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 ICA1LQ8NDH6 482 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 RFWD2Q8NHY2 731 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 ACMSDQ8TDX5 336 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 FAM95CA0A1B0GW59 222 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 ZNF252P-AS1Q0IIN9 211 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 OSTM1Q86WC4 334 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 IFNEQ86WN2 208 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 SERAC1Q96JX3 654 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 CAB39LQ9H9S4 337 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 SCUBE2Q9NQ36 999 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 TMPRSS4Q9NRS4 437 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 SNX15Q9NRS6 342 aa13.43□□□□□ -0.26
PPP4R3B-206ENST00000616407 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 SCAMP3O14828 347 aaKnown RBP13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 KRT16P08779 473 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 NFKBIAP25963 317 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 GJA5P36382 358 aa13.42□□□□□ -0.26
PPP4R3B-206ENST00000616407 VHLP40337 213 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms