RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SEMA3CQ99985 751 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 CERS4Q9HA82 394 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 DEC1Q9P2X7 70 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 SPASTQ9UBP0 616 aa9.62□□□□□ -0.87
CLTCL1-208ENST00000615606 STRCQ7RTU9 1775 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 NCF1BA6NI72 391 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 NCF1CA8MVU1 366 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 NRP1O14786 923 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 APODP05090 189 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 C8AP07357 584 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 NCF1P14598 390 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 NFKB1P19838 968 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 CORO1AP31146 461 aaKnown RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 DDX39BQ13838 428 aaKnown RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ATP13A4Q4VNC1 1196 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 C17orf99Q6UX52 265 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 OR8D1Q8WZ84 308 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 EMID1Q96A84 441 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 FAM136AQ96C01 138 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ZNF333Q96JL9 665 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 CCDC138Q96M89 665 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 FAM161BQ96MY7 647 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 TM6SF2Q9BZW4 377 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ZMYM5Q9UJ78 669 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 COQ4Q9Y3A0 265 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 PDE2AO00408 941 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ITGAVP06756 1048 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 EDNRBP24530 442 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 GLRBP48167 497 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 GPM6BQ13491 265 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 CREG2Q8IUH2 290 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 CHPFQ8IZ52 775 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 OSCP1Q8WVF1 389 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 NMRAL1Q9HBL8 299 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 PCDH18Q9HCL0 1135 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 AGO1Q9UL18 857 aaKnown RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 NEDD8-MDP1E9PL57 170 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 SOCS7O14512 581 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 RAD51BO15315 384 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ALOX15P16050 662 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 TIGD5Q53EQ6 642 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 GRAMD4Q6IC98 578 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 FBXO46Q6PJ61 603 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 TTC7BQ86TV6 843 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 MCOLN3Q8TDD5 553 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 DQX1Q8TE96 717 aaKnown RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 CMTM5Q96DZ9 223 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 RUBCNLQ9H714 662 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 CATSPERZQ9NTU4 200 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 GID8Q9NWU2 228 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 NCKIPSDQ9NZQ3 722 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 MYBPHLA2RUH7 354 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ZNF839A8K0R7 811 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ANKRD65E5RJM6 399 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 SP100P23497 879 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 GRK2P25098 689 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 PTPN9P43378 593 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 FOXD4Q12950 439 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 MMRN1Q13201 1228 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 BOP1Q14137 746 aaKnown RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 PARP15Q460N3 678 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 PRSS55Q6UWB4 352 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 RGL4Q8IZJ4 473 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ALLCQ8N6M5 410 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ECT2Q9H8V3 914 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 WDR41Q9HAD4 459 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 KCND1Q9NSA2 647 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 CNTN3Q9P232 1028 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 ANKRD6Q9Y2G4 727 aa9.61□□□□□ -0.87
CLTCL1-208ENST00000615606 MSI1O43347 362 aaKnown RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 ENO1P06733 434 aaKnown RBP9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 CPA3P15088 417 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 NOVP48745 357 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 DNAL1Q4LDG9 190 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 HES6Q96HZ4 224 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SUSD3Q96L08 255 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 DPEP3Q9H4B8 488 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 BCAS3Q9H6U6 928 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 LRRC19Q9H756 370 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SQORQ9Y6N5 450 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 CFAP73A6NFT4 308 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SLC38A8A6NNN8 435 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 SLCO1B7G3V0H7 640 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 TM9SF1O15321 606 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 RIPK2O43353 540 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 MGEA5O60502 916 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 USP12O75317 370 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 IL1BP01584 269 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 IL10P22301 178 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 TAS2R40P59535 323 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 HIC1Q14526 733 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 KRT72Q14CN4 511 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 KBTBD12Q3ZCT8 623 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 NEPROQ6NW34 567 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 PMF1Q6P1K2 205 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 C16orf89Q6UX73 402 aa9.6□□□□□ -0.87
CLTCL1-208ENST00000615606 MON1BQ7L1V2 547 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms