RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	OR1E1	P30953	314 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ETFB	P38117	255 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	GGCX	P38435	758 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CSNK1E	P49674	416 aa	Known RBP	11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	RACK1	P63244	317 aa	Known RBP	11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ST3GAL2	Q16842	350 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	HLA-B	Q31612	363 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TBC1D3G	Q6DHY5	549 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TBC1D3C	Q6IPX1	549 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CXorf57	Q6NSI4	855 aa	Known RBP	11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	RETSAT	Q6NUM9	610 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	NCEH1	Q6PIU2	408 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ARC	Q7LC44	396 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	PIP4P1	Q86T03	277 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	PRPF39	Q86UA1	669 aa	Known RBP	11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	NAXD	Q8IW45	347 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ATP11C	Q8NB49	1132 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	MYO19	Q96H55	970 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	C1orf74	Q96LT6	269 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	HAPLN3	Q96S86	360 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	FEM1A	Q9BSK4	669 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	SPON2	Q9BUD6	331 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	SELENOO	Q9BVL4	669 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	NEUROG2	Q9H2A3	272 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	GAN	Q9H2C0	597 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TM9SF3	Q9HD45	589 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	METTL5	Q9NRN9	209 aa	Known RBP	11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TM7SF3	Q9NS93	570 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	LIMA1	Q9UHB6	759 aa	Known RBP	11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	APOBEC2	Q9Y235	224 aa	Known RBP	11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TBC1D30	Q9Y2I9	924 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	NCOR2	Q9Y618	2525 aa		11.26	□□□□□ -0.61
NPIPB4-222	ENST00000614197	SPAAR	A0A1B0GVQ0	90 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	FAM170A	A1A519	330 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	SMTNL1	A8MU46	457 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197		E9PAM4	449 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ALOX15B	O15296	676 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	FLRT2	O43155	660 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	SLC7A4	O43246	635 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ATP9B	O43861	1147 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	SH3BP5	O60239	455 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	MAGEC1	O60732	1142 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CALB1	P05937	261 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	C7	P10643	843 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CD59	P13987	128 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	NUDT1	P36639	197 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	FLT3	P36888	993 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	NUMB	P49757	651 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CCT8	P50990	548 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CLCN6	P51797	869 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	GALC	P54803	685 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ATP11A	P98196	1134 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TRIP6	Q15654	476 aa	Known RBP	11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	DLG2	Q15700	870 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CDO1	Q16878	200 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	PPP1R2P3	Q6NXS1	205 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TFAP2D	Q7Z6R9	452 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	FAM131B	Q86XD5	332 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	SLC20A1	Q8WUM9	679 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	PTPRN2	Q92932	1015 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	NT5C3B	Q969T7	300 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CFAP57	Q96MR6	1250 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	FAM129B	Q96TA1	746 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CDC6	Q99741	560 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	C11orf70	Q9BRQ4	267 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ZYG11B	Q9C0D3	744 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	KDM4C	Q9H3R0	1056 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ADAM22	Q9P0K1	906 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ADAMTS1	Q9UHI8	967 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	HPCAL4	Q9UM19	191 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ANKRD6	Q9Y2G4	727 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	PCDHGB2	Q9Y5G2	931 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	PLXND1	Q9Y4D7	1925 aa		11.25	□□□□□ -0.61
NPIPB4-222	ENST00000614197	WDR87	Q6ZQQ6	2873 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	FRYL	O94915	3013 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197		A0A1W2PPC4	97 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	DRGX	A6NNA5	263 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CBX4	O00257	560 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	MCF2L	O15068	1137 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	PRNP	P04156	253 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	KRT3	P12035	628 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	FER	P16591	822 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	MMP8	P22894	467 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	KLK7	P49862	253 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	CCR5	P51681	352 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	GEMIN4	P57678	1058 aa	Known RBP	11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TPM4	P67936	248 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	TYRO3	Q06418	890 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	SLC20A2	Q08357	652 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	KIF19	Q2TAC6	998 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	C5orf22	Q49AR2	442 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	C2CD6	Q53TS8	623 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	RWDD4	Q6NW29	188 aa	Known RBP	11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	DPY19L2P1	Q6NXN4	242 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	DNAJC24	Q6P3W2	148 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	ZNF783	Q6ZMS7	281 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197		Q6ZVU0	165 aa		11.24	□□□□□ -0.61
NPIPB4-222	ENST00000614197	C14orf80	Q86SX3	495 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms