RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 GDF6Q6KF10 455 aaPredicted RBP11.46□□□□□ -0.57
ATF3-211ENST00000613954 C16orf46Q6P387 395 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 C16orf89Q6UX73 402 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 B3GNT6Q6ZMB0 384 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 FAM183BPQ6ZVS7 135 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 TMC7Q7Z402 723 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 MAVSQ7Z434 540 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 C10orf107Q8IVU9 208 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 MPP5Q8N3R9 675 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 HPDLQ96IR7 371 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 PNPOQ9NVS9 261 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 TXNDC16Q9P2K2 825 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 THEGQ9P2T0 379 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 STK39Q9UEW8 545 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 INPP5FQ9Y2H2 1132 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 TRPV2Q9Y5S1 764 aa11.46□□□□□ -0.57
ATF3-211ENST00000613954 TRIP12Q14669 1992 aaPredicted RBP11.46□□□□□ -0.58
ATF3-211ENST00000613954 ARHGAP10A1A4S6 786 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TMEM114B3SHH9 223 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 H2AFYO75367 372 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 TNFAIP8O95379 198 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 GNRH1P01148 92 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 ITGA2BP08514 1039 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 THRAP10827 490 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 PGAM1P18669 254 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 ADRM1Q16186 407 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 CNGA3Q16281 694 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TBC1D25Q3MII6 688 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 CCDC14Q49A88 953 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TCHHL1Q5QJ38 904 aaPredicted RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 UBXN11Q5T124 520 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 HEATR6Q6AI08 1181 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 CCSAPQ6IQ19 270 aaPredicted RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 LCLAT1Q6UWP7 414 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 ALKAL1Q6UXT8 129 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 FRMD7Q6ZUT3 714 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 SETD3Q86TU7 594 aaPredicted RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 SERINC5Q86VE9 423 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 AHI1Q8N157 1196 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 PCSK9Q8NBP7 692 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 DDI1Q8WTU0 396 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TFB1MQ8WVM0 346 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 MPP4Q96JB8 637 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 LRGUKQ96M69 825 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 HEXIM2Q96MH2 286 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 QKIQ96PU8 341 aaKnown RBP eCLIP11.45□□□□□ -0.583e-7■■■□□ 16.5
ATF3-211ENST00000613954 TWNKQ96RR1 684 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TSPAN18Q96SJ8 248 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 SNRNP25Q9BV90 132 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 NXF3Q9H4D5 531 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 EIF2B3Q9NR50 452 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 IRAK4Q9NWZ3 460 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 PCDHB12Q9Y5F1 795 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 SLC22A2O15244 555 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 RECQL4O94761 1208 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TOP3BO95985 862 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 CYP2F1P24903 491 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TYK2P29597 1187 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 RANBP1P43487 201 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 HK2P52789 917 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 KLF10Q13118 480 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TRNP1Q6NT89 227 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 CASC4Q6P4E1 433 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 LRRC8BQ6P9F7 803 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 FBXL19Q6PCT2 694 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 EPGNQ6UW88 154 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 TMEM130Q8N3G9 435 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 HIPK4Q8NE63 616 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 ADCY4Q8NFM4 1077 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 BEST2Q8NFU1 509 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 SHKBP1Q8TBC3 707 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 RAET1EQ8TD07 263 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 PXYLP1Q8TE99 480 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 IRGQQ8WZA9 623 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 DCUN1D1Q96GG9 259 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 CDH19Q9H159 772 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 NGRNQ9NPE2 291 aaKnown RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 CLIC5Q9NZA1 410 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 VPS28Q9UK41 221 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 BARX2Q9UMQ3 279 aaPredicted RBP11.45□□□□□ -0.58
ATF3-211ENST00000613954 HES2Q9Y543 173 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 GMEB1Q9Y692 573 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 CITO14578 2027 aa11.45□□□□□ -0.58
ATF3-211ENST00000613954 LOC100653049A0A140TA62 436 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 WDR27A2RRH5 827 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 KPNA7A9QM74 516 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 HACD1B0YJ81 288 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 DCXO43602 365 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 KRT34O76011 436 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 SMIM18P0DKX4 95 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 CPA3P15088 417 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 ORC1Q13415 861 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 ZBTB6Q15916 424 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 DPYSL2Q16555 572 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 GRTP1Q5TC63 336 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 KLC3Q6P597 504 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 ZDHHC17Q8IUH5 632 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 UBA3Q8TBC4 463 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 DLG3Q92796 817 aa11.44□□□□□ -0.58
ATF3-211ENST00000613954 NMD3Q96D46 503 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms