RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 TOPORSQ9NS56 1045 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-204ENST00000613575 PIH1D1Q9NWS0 290 aaKnown RBP6.86□□□□□ -1.31
CDKAL1-204ENST00000613575 SIRT5Q9NXA8 310 aa6.86□□□□□ -1.31
CDKAL1-204ENST00000613575 STMN3Q9NZ72 180 aa6.86□□□□□ -1.31
CDKAL1-204ENST00000613575 TNFRSF10DQ9UBN6 386 aa6.86□□□□□ -1.31
CDKAL1-204ENST00000613575 ATP6V1HQ9UI12 483 aa6.86□□□□□ -1.31
CDKAL1-204ENST00000613575 DMTF1Q9Y222 760 aa6.86□□□□□ -1.31
CDKAL1-204ENST00000613575 NEU2Q9Y3R4 380 aa6.86□□□□□ -1.31
CDKAL1-204ENST00000613575 IGKV6-21A0A0C4DH24 114 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 TCRBV7S2A1N4TA0A589 114 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 A8MUI8 341 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 TRDMT1O14717 391 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 AREL1O15033 823 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 TLR3O15455 904 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 SPOPO43791 374 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MAFO75444 373 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 FGF18O76093 207 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 SUN1O94901 812 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 ECDO95905 644 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 KRT7P08729 469 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 DLATP10515 647 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 PIM1P11309 404 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 ESRRAP11474 423 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 CCNB1P14635 433 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 TCEA1P23193 301 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MAPK4P31152 587 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MTHFRP42898 656 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MMP13P45452 471 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 EFNA5P52803 228 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 NLRP11P59045 1033 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 RPL26P61254 145 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 POLR2GP62487 172 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 CAV1Q03135 178 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 KLF1Q13351 362 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MAMLD1Q13495 774 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 CUL2Q13617 745 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 SLC29A2Q14542 456 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 TGFBIQ15582 683 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 CCNG2Q16589 344 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 ERMARDQ5T6L9 678 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 ANGEL2Q5VTE6 544 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MFSD5Q6N075 450 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 DRICH1Q6PGQ1 229 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 DHRS4L2Q6PKH6 230 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 TTLQ8NG68 377 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 GPR152Q8TDT2 470 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 SEPT1Q8WYJ6 367 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 TMEM237Q96Q45 408 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 CGRRF1Q99675 332 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 ZNF184Q99676 751 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 PI4K2AQ9BTU6 479 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 CCDC134Q9H6E4 229 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 APOBEC3GQ9HC16 384 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MRPL47Q9HD33 250 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 C1orf112Q9NSG2 853 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 ABI2Q9NYB9 513 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MRPL39Q9NYK5 338 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 GPRC5DQ9NZD1 345 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 CHORDC1Q9UHD1 332 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 PFDN2Q9UHV9 154 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 SOX13Q9UN79 622 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 SLC8A2Q9UPR5 921 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 MYH11P35749 1972 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 ZNF541Q9H0D2 1346 aa6.85□□□□□ -1.31
CDKAL1-204ENST00000613575 TCRBV5S1A1TA0A578 114 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 DLL1O00548 723 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 SLC22A1O15245 554 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 PSTPIP1O43586 416 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 FAM189A1O60320 539 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 AGTP01019 485 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 UBTFL6P0CB48 400 aaPredicted RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 MTHFD1P11586 935 aaKnown RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 KRT10P13645 584 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 KRT5P13647 590 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 TNNI1P19237 187 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 CDH5P33151 784 aaPredicted RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 RASSF2P50749 326 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 STAT5BP51692 787 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 POLGP54098 1239 aaPredicted RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 GNG2P59768 71 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 MAGOHP61326 146 aaKnown RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 ATP6V0D1P61421 351 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 NOMO3P69849 1222 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 FSTL1Q12841 308 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 SIM2Q14190 667 aaPredicted RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 SURF1Q15526 300 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 RGS21Q2M5E4 152 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 Q3ZCU0 254 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 LIN9Q5TKA1 542 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 LRRC38Q5VT99 294 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 SHEQ5VZ18 495 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 BORAQ6PGQ7 559 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 METTL7BQ6UX53 244 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 LRRC74BQ6ZQY2 392 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 ADAT2Q7Z6V5 191 aaKnown RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 MRPL10Q7Z7H8 261 aaKnown RBP6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 CPNE8Q86YQ8 564 aa6.84□□□□□ -1.31
CDKAL1-204ENST00000613575 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms