RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 DESI2Q9BSY9 194 aa17.04■□□□□ 0.32
IRF1-211ENST00000613424 LACRTQ9GZZ8 138 aa17.04■□□□□ 0.32
IRF1-211ENST00000613424 TMEM245Q9H330 911 aa17.04■□□□□ 0.32
IRF1-211ENST00000613424 POLMQ9NP87 494 aaPredicted RBP17.04■□□□□ 0.32
IRF1-211ENST00000613424 CWC15Q9P013 229 aaKnown RBP17.04■□□□□ 0.32
IRF1-211ENST00000613424 SLCO3A1Q9UIG8 710 aa17.04■□□□□ 0.32
IRF1-211ENST00000613424 BTNL10A8MVZ5 291 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 FGF10O15520 208 aaPredicted RBP17.03■□□□□ 0.32
IRF1-211ENST00000613424 ARHGAP6O43182 974 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 DAPK3O43293 454 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 APBB3O95704 486 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 EPHX1P07099 455 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 SRPRAP08240 638 aaKnown RBP17.03■□□□□ 0.32
IRF1-211ENST00000613424 HLA-EP13747 358 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 SLC1A1P43005 524 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 NRLP54845 237 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 ST8SIA6P61647 398 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 HEATR6Q6AI08 1181 aaKnown RBP17.03■□□□□ 0.32
IRF1-211ENST00000613424 POLNQ7Z5Q5 900 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 KDM1BQ8NB78 822 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 SPON2Q9BUD6 331 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 FAM126AQ9BYI3 521 aaPredicted RBP17.03■□□□□ 0.32
IRF1-211ENST00000613424 IRF2BPLQ9H1B7 796 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 PCDH18Q9HCL0 1135 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 CD248Q9HCU0 757 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 HYOU1Q9Y4L1 999 aa17.03■□□□□ 0.32
IRF1-211ENST00000613424 DMDP11532 3685 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 A0A0U1RQJ8 604 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 TCRBV21S2A2A0A5A6 115 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 H3BRJ5 948 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 BUB1O43683 1085 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 BUB1BO60566 1050 aaPredicted RBP17.02■□□□□ 0.32
IRF1-211ENST00000613424 SNAP91O60641 907 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 ALDH1A2O94788 518 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 KRT7P08729 469 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 ERCC2P18074 760 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 COMTP21964 271 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 GJC1P36383 396 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 ACVRL1P37023 503 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 ARL4AP40617 200 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 FNTBP49356 437 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 STK19P49842 368 aaPredicted RBP17.02■□□□□ 0.32
IRF1-211ENST00000613424 ARSEP51690 589 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 CDH6P55285 790 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 POLD3Q15054 466 aaPredicted RBP17.02■□□□□ 0.32
IRF1-211ENST00000613424 IL31Q6EBC2 164 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 ZNF366Q8N895 744 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 FAM71BQ8TC56 605 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 ATRIPQ8WXE1 791 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 ANP32BQ92688 251 aaKnown RBP17.02■□□□□ 0.32
IRF1-211ENST00000613424 ARHGEF2Q92974 986 aaKnown RBP17.02■□□□□ 0.32
IRF1-211ENST00000613424 C2orf49Q9BVC5 232 aaPredicted RBP17.02■□□□□ 0.32
IRF1-211ENST00000613424 ACE2Q9BYF1 805 aaPredicted RBP17.02■□□□□ 0.32
IRF1-211ENST00000613424 MAGEH1Q9H213 219 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 NOL6Q9H6R4 1146 aaKnown RBP17.02■□□□□ 0.32
IRF1-211ENST00000613424 ZSCAN32Q9NX65 697 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 EBF1Q9UH73 591 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 SUN2Q9UH99 717 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 VPS51Q9UID3 782 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 ALG6Q9Y672 507 aa17.02■□□□□ 0.32
IRF1-211ENST00000613424 TTC34A8MYJ7 566 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 SYNCRIPO60506 623 aaKnown RBP17.01■□□□□ 0.31
IRF1-211ENST00000613424 RAMP2O60895 175 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 MT-CO1P00395 513 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 CD48P09326 243 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 GLDCP23378 1020 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 IL4RP24394 825 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 NNMTP40261 264 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 VASPP50552 380 aaPredicted RBP17.01■□□□□ 0.31
IRF1-211ENST00000613424 NAP1L1P55209 391 aaKnown RBP17.01■□□□□ 0.31
IRF1-211ENST00000613424 DPYSQ14117 519 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 KRT81Q14533 505 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 STARD3Q14849 445 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 ANO7Q6IWH7 933 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 LONP2Q86WA8 852 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 RASSF3Q86WH2 238 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 UMODL1-AS1Q8N2C9 162 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 TXLNBQ8N3L3 684 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 DCAF4L2Q8NA75 395 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 KCTD6Q8NC69 237 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 TPCN2Q8NHX9 752 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 HMGB4Q8WW32 186 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 TSC1Q92574 1164 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 ATOH1Q92858 354 aaPredicted RBP17.01■□□□□ 0.31
IRF1-211ENST00000613424 CALR3Q96L12 384 aaKnown RBP17.01■□□□□ 0.31
IRF1-211ENST00000613424 CSPG4P5Q96PW8 444 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 MTG2Q9H4K7 406 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 ATP13A1Q9HD20 1204 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 DONSONQ9NYP3 566 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 SLC25A13Q9UJS0 675 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 ADGRG1Q9Y653 693 aa17.01■□□□□ 0.31
IRF1-211ENST00000613424 MUC22E2RYF6 1773 aaPredicted RBP17■□□□□ 0.31
IRF1-211ENST00000613424 CCDC163A0A0D9SF12 145 aa17■□□□□ 0.31
IRF1-211ENST00000613424 RASA4BC9J798 803 aa17■□□□□ 0.31
IRF1-211ENST00000613424 CBX4O00257 560 aa17■□□□□ 0.31
IRF1-211ENST00000613424 AXIN1O15169 862 aa17■□□□□ 0.31
IRF1-211ENST00000613424 RASA4O43374 803 aa17■□□□□ 0.31
IRF1-211ENST00000613424 ZMPSTE24O75844 475 aa17■□□□□ 0.31
IRF1-211ENST00000613424 GABRG2P18507 467 aa17■□□□□ 0.31
IRF1-211ENST00000613424 AMPD1P23109 780 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms