RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 KITP10721 976 aa15.02■□□□□ -0
CDH1-213ENST00000612417 NPR3P17342 541 aa15.02■□□□□ -0
CDH1-213ENST00000612417 PSMB4P28070 264 aa15.02■□□□□ -0
CDH1-213ENST00000612417 AIF1P55008 147 aa15.02■□□□□ -0
CDH1-213ENST00000612417 FRG1Q14331 258 aaKnown RBP15.02■□□□□ -0
CDH1-213ENST00000612417 ZCCHC23Q6ZST2 131 aa15.02■□□□□ -0
CDH1-213ENST00000612417 ABI1Q8IZP0 508 aa15.02■□□□□ -0
CDH1-213ENST00000612417 ZNF567Q8N184 647 aa15.02■□□□□ -0
CDH1-213ENST00000612417 STMN2Q93045 179 aa15.02■□□□□ -0
CDH1-213ENST00000612417 FAM210AQ96ND0 272 aa15.02■□□□□ -0
CDH1-213ENST00000612417 SLC9A7Q96T83 725 aa15.02■□□□□ -0
CDH1-213ENST00000612417 PRDM12Q9H4Q4 367 aa15.02■□□□□ -0
CDH1-213ENST00000612417 KRT82Q9NSB4 513 aa15.02■□□□□ -0
CDH1-213ENST00000612417 NMRK1Q9NWW6 199 aa15.02■□□□□ -0
CDH1-213ENST00000612417 SYBUQ9NX95 663 aa15.02■□□□□ -0
CDH1-213ENST00000612417 MARCOQ9UEW3 520 aaPredicted RBP15.02■□□□□ -0
CDH1-213ENST00000612417 CDH9Q9ULB4 789 aa15.02■□□□□ -0
CDH1-213ENST00000612417 RAD54BQ9Y620 910 aa15.02■□□□□ -0
CDH1-213ENST00000612417 SCN5AQ14524 2016 aa15.02■□□□□ -0
CDH1-213ENST00000612417 F8W810 466 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 SPECC1L-ADORA2AF8WAN1 911 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 TM7SF2O76062 418 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 ITGB1P05556 798 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 POLBP06746 335 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 FAM200BP0CF97 657 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 MAGEA12P43365 314 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 CCL23P55773 120 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 MAP3K7CLP57077 242 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 SESN2P58004 480 aaPredicted RBP15.02□□□□□ -0.01
CDH1-213ENST00000612417 PITX1P78337 314 aaPredicted RBP15.02□□□□□ -0.01
CDH1-213ENST00000612417 TUBB3Q13509 450 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 PCLAFQ15004 111 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 CCDC6Q16204 474 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 TRMT5Q32P41 509 aaKnown RBP15.02□□□□□ -0.01
CDH1-213ENST00000612417 SPANXN3Q5MJ09 141 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 SNX30Q5VWJ9 437 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 NET1Q7Z628 596 aaPredicted RBP15.02□□□□□ -0.01
CDH1-213ENST00000612417 LMNTD2Q8IXW0 634 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 PPP1R14CQ8TAE6 165 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 RSPH1Q8WYR4 309 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 ITFG2Q969R8 447 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 SCLYQ96I15 445 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 ZNF778Q96MU6 729 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 HIPK3Q9H422 1215 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 FAM96AQ9H5X1 160 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 TMEM161AQ9NX61 479 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 SLC17A6Q9P2U8 582 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 ZNF212Q9UDV6 495 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 DSEQ9UL01 958 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 LRFN2Q9ULH4 789 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 PSAT1Q9Y617 370 aa15.02□□□□□ -0.01
CDH1-213ENST00000612417 CAPN9O14815 690 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 INPPL1O15357 1258 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 TBX10O75333 385 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 AP1G2O75843 785 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 BEST1O76090 585 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 DDHD2O94830 711 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 PROCP04070 461 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 SERPINE1P05121 402 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 PRKCGP05129 697 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 GRK2P25098 689 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 GP5P40197 560 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 OR1G1P47890 313 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 SLC1A6P48664 564 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 SCAPQ12770 1279 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 GPNMBQ14956 572 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 MUM1Q2TAK8 710 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 ANO7Q6IWH7 933 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 CD300LGQ6UXG3 332 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 SLC39A5Q6ZMH5 540 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 RFX8Q6ZV50 586 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 PAQR9Q6ZVX9 377 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 FBXO27Q8NI29 283 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 NTAN1Q96AB6 310 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 CERS2Q96G23 380 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 CPNE1Q99829 537 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 EBF4Q9BQW3 602 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 PPP1R12CQ9BZL4 782 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 TBC1D13Q9NVG8 400 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 ZFATQ9P243 1243 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 ADAM28Q9UKQ2 775 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 ARHGEF37A1IGU5 675 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 A6NHS1 94 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 M0QYT0 321 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 ALOX15P16050 662 aaPredicted RBP15.01□□□□□ -0.01
CDH1-213ENST00000612417 PAX3P23760 479 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 CPA2P48052 419 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 RPL10AP62906 217 aaKnown RBP15.01□□□□□ -0.01
CDH1-213ENST00000612417 SEMA3BQ13214 749 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 RABGAP1LQ5R372 815 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 GRTP1Q5TC63 336 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 TRIM68Q6AZZ1 485 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 OVOS1Q6IE37 1185 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 LRRC74BQ6ZQY2 392 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 SCUBE1Q8IWY4 988 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 THEM5Q8N1Q8 247 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 NRG4Q8WWG1 115 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 NDRG1Q92597 394 aaKnown RBP15.01□□□□□ -0.01
CDH1-213ENST00000612417 PCED1BQ96HM7 432 aa15.01□□□□□ -0.01
CDH1-213ENST00000612417 RILPQ96NA2 401 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms