RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CALCOCO1Q9P1Z2 691 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 DOCK4Q8N1I0 1966 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 GOLGA6L7A0A1B0GV03 622 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 GOLGA6CA6NDK9 693 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 TBC1D3BA6NDS4 549 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 F5H5T6 163 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 TSPAN3O60637 253 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 GOLGA6DP0CG33 693 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 TACR2P21452 398 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 SLC6A4P31645 630 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 TNFRSF4P43489 277 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 LMAN1P49257 510 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 DGKGP49619 791 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 HLTFQ14527 1009 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 CDO1Q16878 200 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 C15orf59Q2T9L4 293 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 ARL13BQ3SXY8 428 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 SPDYCQ5MJ68 293 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 EMC10Q5UCC4 262 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 RNF43Q68DV7 783 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 AADACL2Q6P093 401 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 RFWD3Q6PCD5 774 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 PHTF2Q8N3S3 785 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 TERB1Q8NA31 727 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 C12orf50Q8NA57 414 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 DTWD2Q8NBA8 298 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 HJURPQ8NCD3 748 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 FAM76AQ8TAV0 307 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 FNIP1Q8TF40 1166 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 FAM172AQ8WUF8 416 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 BHMTQ93088 406 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 RUNDC3BQ96NL0 473 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 HAPLN3Q96S86 360 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 PRMT1Q99873 361 aaKnown RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 CNPY3Q9BT09 278 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 TXLNGYQ9BZA5 131 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 KCNH6Q9H252 994 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 PLSCR2Q9NRY7 297 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 GOLGA6AQ9NYA3 693 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 XPO7Q9UIA9 1087 aaKnown RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 ANAPC7Q9UJX3 599 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 SLC27A6Q9Y2P4 619 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 MUC6Q6W4X9 2439 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 TMEM191CA6NGB0 347 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 GALR2O43603 387 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 SHOX2O60902 331 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 TBL1XO60907 577 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 ATG13O75143 517 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 PAGE1O75459 146 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 CISD3P0C7P0 127 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 HOXD9P28356 352 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 HSD17B3P37058 310 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 FNTAP49354 379 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 ATXN1P54253 815 aaKnown RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 HDAC4P56524 1084 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 MRPS21P82921 87 aaKnown RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 KDSRQ06136 332 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 UAP1Q16222 522 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 TTMPQ5BVD1 217 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 RABGAP1LQ5R372 815 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 RAP1GAP2Q684P5 730 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 TTC27Q6P3X3 843 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 ADAT2Q7Z6V5 191 aaKnown RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 FAM131BQ86XD5 332 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 JAMLQ86YT9 394 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 CCDC117Q8IWD4 279 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-217ENST00000611848 LGI2Q8N0V4 545 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 SPEM1Q8N4L4 309 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 SLCO2A1Q92959 643 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 ARL8AQ96BM9 186 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 C1orf74Q96LT6 269 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 RUFY1Q96T51 708 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 NCAPGQ9BPX3 1015 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 TRIM51Q9BSJ1 452 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 ZDHHC18Q9NUE0 388 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 STARD13Q9Y3M8 1113 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 HS3ST4Q9Y661 456 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 NFS1Q9Y697 457 aa9.08□□□□□ -0.96
SMAD4-217ENST00000611848 CHURC1-FNTBB4DL54 471 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 K7EQS6 105 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 MYO1FO00160 1098 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 PPFIA2O75334 1257 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 PROSCO94903 275 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 RARAP10276 462 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 PSMA2P25787 234 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 MAN1A1P33908 653 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 ADRA1BP35368 520 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 ACTN2P35609 894 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 COILP38432 576 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-217ENST00000611848 SGSHP51688 502 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 AIF1P55008 147 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 RPS24P62847 133 aaKnown RBP9.07□□□□□ -0.96
SMAD4-217ENST00000611848 AUHQ13825 339 aaKnown RBP9.07□□□□□ -0.96
SMAD4-217ENST00000611848 GAS6Q14393 721 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 ACAP1Q15027 740 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 E2F5Q15329 346 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 C5orf22Q49AR2 442 aa9.07□□□□□ -0.96
SMAD4-217ENST00000611848 HSF5Q4G112 596 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms