RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 UGT3A1Q6NUS8 523 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 NECAB2Q7Z6G3 386 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 REM2Q8IYK8 340 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 AGGF1Q8N302 714 aaeCLIP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 MAB21L3Q8N8X9 362 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 RSPH1Q8WYR4 309 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 N4BP2L2Q92802 583 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 APOPT1Q96IL0 206 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 KCTD15Q96SI1 283 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 IL22Q9GZX6 179 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 SYTL2Q9HCH5 934 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ORC6Q9Y5N6 252 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TBL1XO60907 577 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 LRIG2O94898 1065 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 PAX3P23760 479 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 GJA5P36382 358 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 GLUD2P49448 558 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 POM121L1PQ3SYA9 428 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 GRTP1Q5TC63 336 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 PRSS55Q6UWB4 352 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 CCDC149Q6ZUS6 474 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ECHDC2Q86YB7 292 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TEKT4Q8WW24 435 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 CERS2Q96G23 380 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 EBNA1BP2Q99848 306 aaKnown RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 SPG21Q9NZD8 308 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ADAMTS5Q9UNA0 930 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 NR2E3Q9Y5X4 410 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 KNL1Q8NG31 2342 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TCRBV9S1A1TA0A576 114 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 GUCA1CO95843 209 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 PDHA1P08559 390 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 RBP1P09455 135 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ACRP10323 421 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 MTFR1Q15390 333 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 CA9Q16790 459 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 FAM187BQ17R55 369 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ARMC12Q5T9G4 340 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 PLPP4Q5VZY2 271 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 SEL1L3Q68CR1 1132 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 RFWD3Q6PCD5 774 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 BORCS6Q96GS4 357 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 CPNE1Q99829 537 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TMEM120AQ9BXJ8 343 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TRIM15Q9C019 465 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 LRRC4CQ9HCJ2 640 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 SLC13A4Q9UKG4 626 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ALOX15BO15296 676 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 EDIL3O43854 480 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TRIM13O60858 407 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 GRK2P25098 689 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 PEX19P40855 299 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 PEX5P50542 639 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 NRLP54845 237 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 DAOAP59103 153 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ENPEPQ07075 957 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 FASTKD3Q14CZ7 662 aaKnown RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 CNGA3Q16281 694 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 DNAL1Q4LDG9 190 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 PCID2Q5JVF3 399 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 BRMS1LQ5PSV4 323 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TAC4Q86UU9 113 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 EXOC3L1Q86VI1 746 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 MYO1HQ8N1T3 1032 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 OR6K2Q8NGY2 324 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 GRIN3AQ8TCU5 1115 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 STK32AQ8WU08 396 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 TRIB2Q92519 343 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF75CPQ92670 426 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 NKD2Q969F2 451 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 CENPKQ9BS16 269 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 ARHGEF4Q9NR80 690 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.41□□□□□ -1.224e-7■■■□□ 19.2
CSDE1-218ENST00000610726 IL1RAPL1Q9NZN1 696 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-218ENST00000610726 EFR3BQ9Y2G0 817 aa7.41□□□□□ -1.22
CSDE1-218ENST00000610726 MYH11P35749 1972 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 A0A0U1RQF3 1178 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 TMEM247A6NEH6 219 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 MTA2O94776 668 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 NUDT17P0C025 328 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 FMO4P31512 558 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 PPM1AP35813 382 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 PTPN9P43378 593 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 NUDT2P50583 147 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 WNT3AP56704 352 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 CTBP1Q13363 440 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 GALNTL6Q49A17 601 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 CERCAMQ5T4B2 595 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 SYPL2Q5VXT5 272 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 OTOAQ7RTW8 1153 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 NPAS4Q8IUM7 802 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 LMO3Q8TAP4 145 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 CCDC138Q96M89 665 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 ACSS3Q9H6R3 686 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 BPIFA1Q9NP55 256 aa7.4□□□□□ -1.22
CSDE1-218ENST00000610726 MRPL40Q9NQ50 206 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms