RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 AHCYL1O43865 530 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 TSPAN3O60637 253 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 MAGEC1O60732 1142 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 SRP72O76094 671 aaKnown RBP7□□□□□ -1.29
SYNPO2-206ENST00000610556 APOA4P06727 396 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 HNRNPCP07910 306 aaKnown RBP eCLIP7□□□□□ -1.29
SYNPO2-206ENST00000610556 FGFR1P11362 822 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 NCF1P14598 390 aaPredicted RBP7□□□□□ -1.29
SYNPO2-206ENST00000610556 NOS2P35228 1153 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 MATKP42679 507 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 ABL2P42684 1182 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF132P52740 706 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 CCL15Q16663 113 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 SOWAHAQ2M3V2 549 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 ANO4Q32M45 955 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 MIB1Q86YT6 1006 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 BBS5Q8N3I7 341 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 B3GALNT2Q8NCR0 500 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 TUBGCP3Q96CW5 907 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 TEPSINQ96N21 525 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 EIF2AQ9BY44 585 aaKnown RBP7□□□□□ -1.29
SYNPO2-206ENST00000610556 PIDD1Q9HB75 910 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 MRPL40Q9NQ50 206 aaKnown RBP7□□□□□ -1.29
SYNPO2-206ENST00000610556 ARHGEF4Q9NR80 690 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 CDH22Q9UJ99 828 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF180Q9UJW8 692 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 PSAT1Q9Y617 370 aa7□□□□□ -1.29
SYNPO2-206ENST00000610556 DDX60Q8IY21 1712 aaKnown RBP7□□□□□ -1.29
SYNPO2-206ENST00000610556 TRPC5OSA6NMA1 111 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 NR5A2O00482 541 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 LIN7AO14910 233 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 UBDO15205 165 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 HDAC3O15379 428 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 SNX2O60749 519 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 AMHP03971 560 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PTPN1P18031 435 aaKnown RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PIK3R1P27986 724 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PCSK1P29120 753 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CDK7P50613 346 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PGGT1BP53609 377 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 FOLH1Q04609 750 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC18A2Q05940 514 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 TNFAIP8L3Q5GJ75 292 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 C6orf10Q5SRN2 563 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ZBTB49Q6ZSB9 765 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 MARK2Q7KZI7 788 aaKnown RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 AMIGO2Q86SJ2 522 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 LINC00523Q86TU6 105 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CAND1Q86VP6 1230 aaKnown RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 SPATA2LQ8IUW3 424 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 APLFQ8IW19 511 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ARFGAP1Q8N6T3 406 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PQLC3Q8N755 202 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 MTMR14Q8NCE2 650 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CDC26Q8NHZ8 85 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ACMSDQ8TDX5 336 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CDCA5Q96FF9 252 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PANX3Q96QZ0 392 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 TUBGCP5Q96RT8 1024 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 NPAS2Q99743 824 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CCDC90BQ9GZT6 254 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CDHR5Q9HBB8 845 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 NT5MQ9NPB1 228 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ABI2Q9NYB9 513 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 XPR1Q9UBH6 696 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CACNG4Q9UBN1 327 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 MORF4L1Q9UBU8 362 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 FETUBQ9UGM5 382 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 SORCS3Q9UPU3 1222 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 COL24A1Q17RW2 1714 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 RRN3P2A6NIE6 340 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ZBTB24O43167 697 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ANXA9O76027 345 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 MPOP05164 745 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CHRNGP07510 517 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 VCLP18206 1134 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 IDH3AP50213 366 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 AQP4P55087 323 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ACTR3P61158 418 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF235Q14590 738 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PPP1R15BQ5SWA1 713 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 TMEM198Q66K66 360 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ABI1Q8IZP0 508 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF567Q8N184 647 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 THAP11Q96EK4 314 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 GAD1Q99259 594 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 TMEM79Q9BSE2 394 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 DRC3Q9H069 523 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PDLIM7Q9NR12 457 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CRYL1Q9Y2S2 319 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 DDX60LQ5H9U9 1706 aaKnown RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 FAM95CA0A1B0GW59 222 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 SUPT3HB4E1H0 165 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 BHMG1C9JSJ3 638 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 SPTLC1O15269 473 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 RFPL1O75677 317 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 POMCP01189 267 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 LINGO3P0C6S8 592 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 NPR3P17342 541 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 BDNFP23560 247 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms