RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 AFMIDQ63HM1 303 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 ZNF280DQ6N043 979 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 CYB5D1Q6P9G0 228 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 RASSF3Q86WH2 238 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 ISL2Q96A47 359 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 KLHL29Q96CT2 875 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 FCRL5Q96RD9 977 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 IL12RB2Q99665 862 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 MLPHQ9BV36 600 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-206ENST00000609853 SLC13A1Q9BZW2 595 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 SIK2Q9H0K1 926 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 SAR1AQ9NR31 198 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 CHKBQ9Y259 395 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 PCDHB7Q9Y5E2 793 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 FNDC1Q4ZHG4 1894 aaPredicted RBP12.21□□□□□ -0.46
USP6NL-206ENST00000609853 A0A1W2PQH9 124 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 F8W810 466 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 KIF3CO14782 793 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 MGRN1O60291 552 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 B4GALT3O60512 393 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ITGA2BP08514 1039 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 CRADDP78560 199 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PDE1BQ01064 536 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 RIPK1Q13546 671 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 CTXN3Q4LDR2 81 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ANKRD20A4Q4UJ75 823 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 CDHR3Q6ZTQ4 885 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ASRGL1Q7L266 308 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 NLRP9Q7RTR0 991 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 NUDCD3Q8IVD9 361 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ARHGAP12Q8IWW6 846 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 RTL3Q8N8U3 475 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 NETO2Q8NC67 525 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 STKLD1Q8NE28 680 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 C2orf15Q8WU43 125 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PTCD2Q8WV60 388 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PTPRN2Q92932 1015 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 E2F7Q96AV8 911 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SLC39A13Q96H72 371 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SIKE1Q9BRV8 207 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 MRPL9Q9BYD2 267 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 NPHS2Q9NP85 383 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ARHGEF3Q9NR81 526 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PCMTD2Q9NV79 361 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SOX13Q9UN79 622 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SNX10Q9Y5X0 201 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 VWA8A3KMH1 1905 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 DOCK4Q8N1I0 1966 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 E9PAM4 449 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 F5H423 210 aaPredicted RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 H7C4K7 107 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 DFFAO00273 331 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ENPP3O14638 875 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 TIMM44O43615 452 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 DNAJC6O75061 913 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ALDH2P05091 517 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 BPGMP07738 259 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 NQO1P15559 274 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 BGNP21810 368 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 FGFR3P22607 806 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 TUBP50607 506 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 CDK7P50613 346 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 NDST2P52849 883 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 GEMP55040 296 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 CSE1LP55060 971 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PLEKHG4Q58EX7 1191 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SUGP1Q8IWZ8 645 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SPPL2BQ8TCT7 592 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SEPT8Q92599 483 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 INPP5DQ92835 1189 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ZNF669Q96BR6 464 aaPredicted RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 ERP27Q96DN0 273 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 CELF6Q96J87 481 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SPATA17Q96L03 361 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 CEP295NLQ96MC4 621 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 RAB3IPQ96QF0 476 aaPredicted RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 TMEM175Q9BSA9 504 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 MYLK2Q9H1R3 596 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 C12orf65Q9H3J6 166 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 NMUR1Q9HB89 426 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PPARGC1AQ9UBK2 798 aaKnown RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 SFMBT1Q9UHJ3 866 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 GGT7Q9UJ14 662 aa12.2□□□□□ -0.46
USP6NL-206ENST00000609853 PRG3Q9Y2Y8 225 aaPredicted RBP12.2□□□□□ -0.46
USP6NL-206ENST00000609853 CENPFP49454 3210 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 ZCWPW2A0A1B0GU75 182 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 MAFKO60675 156 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 TRPA1O75762 1119 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 ALDOAP04075 364 aaKnown RBP12.19□□□□□ -0.46
USP6NL-206ENST00000609853 OR4Q2P0C623 313 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 RHOQP17081 205 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 YWHAQP27348 245 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 KPNA1P52294 538 aaPredicted RBP12.19□□□□□ -0.46
USP6NL-206ENST00000609853 ARFIP2P53365 341 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 TTC3P53804 2025 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 TBX4P57082 545 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms