RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 CD86P42081 329 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 AFDNP55196 1824 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 BST1Q10588 318 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 TJAP1Q5JTD0 557 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 PLEKHA7Q6IQ23 1121 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 LENG9Q96B70 501 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 CPXM1Q96SM3 734 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 SEPHS2Q99611 448 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 FAM50BQ9Y247 325 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 BUD23O43709 281 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 GPC1P35052 558 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 CNTN1Q12860 1018 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 PLD1Q13393 1074 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 BOP1Q14137 746 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 CRYMQ14894 314 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 YTHDF3Q7Z739 585 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 C11orf74Q86VG3 221 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 OR56A4Q8NGH8 313 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 RIN3Q8TB24 985 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 STK32AQ8WU08 396 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 HIC2Q96JB3 615 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 H2AFY2Q9P0M6 372 aaPredicted RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 ST3GAL5Q9UNP4 418 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 CST3P01034 146 aaPredicted RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 C4BPAP04003 597 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 ATP5BP06576 529 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 RAG1P15918 1043 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 ME2P23368 584 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 CHI3L1P36222 383 aaPredicted RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 ARL4DP49703 201 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 JAM2P57087 298 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 IRX1P78414 480 aaPredicted RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 MRPS5P82675 430 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 STARD3Q14849 445 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 LBX2Q6XYB7 198 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 GPR141Q7Z602 305 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 STX19Q8N4C7 294 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 LHX5Q9H2C1 402 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 SLCO1B3Q9NPD5 702 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 A0A087X1B8 175 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 TCRBV9S1A1TA0A576 114 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 STAU1O95793 577 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 CRYBB1P53674 252 aaPredicted RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 CSTF3Q12996 717 aaKnown RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 GDPD5Q8WTR4 605 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 B3GNT5Q9BYG0 378 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 ST6GALNAC4Q9H4F1 302 aa14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 HMX1Q9NP08 348 aaPredicted RBP14.49□□□□□ -0.09
PCDHB16-201ENST00000609684 LTN1O94822 1766 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 DLG5Q8TDM6 1919 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 TCRBV7S2A1N4TA0A589 114 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 SYNCRIPO60506 623 aaKnown RBP14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 HOXB8P17481 243 aaPredicted RBP14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 ATP5C1P36542 298 aaKnown RBP14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 RUNX1T1Q06455 604 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 TRAF2Q12933 501 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 TP53BP2Q13625 1128 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 DHFR2Q86XF0 187 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 SLC41A1Q8IVJ1 513 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 PCDH18Q9HCL0 1135 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 MORF4L1Q9UBU8 362 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 ADGRA3Q8IWK6 1321 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 TMEM114B3SHH9 223 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 UNC5CO95185 931 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 CLPTM1O96005 669 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 FCGR1AP12314 374 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 NEK2P51955 445 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 WASHC5Q12768 1159 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 ILF2Q12905 390 aaKnown RBP14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 CYP2R1Q6VVX0 501 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 PPTC7Q8NI37 304 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 RNPEPQ9H4A4 650 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 ALG9Q9H6U8 611 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 FBXO6Q9NRD1 293 aaPredicted RBP14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 SFMBT1Q9UHJ3 866 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 C15orf41Q9Y2V0 281 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 E7ENQ6 273 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 INPP4BO15327 924 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 PEX10O60683 326 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 SMNDC1O75940 238 aaKnown RBP eCLIP14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 MLNP12872 115 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 FASP25445 335 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 PCYT1AP49585 367 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 BCL2L1Q07817 233 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 LRRC74BQ6ZQY2 392 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 TRIM48Q8IWZ4 208 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 LRRC57Q8N9N7 239 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 NSMCE2Q96MF7 247 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 CATSPERZQ9NTU4 200 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 IL1RAPL1Q9NZN1 696 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 NDUFA13Q9P0J0 144 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 BTBD7Q9P203 1132 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 TUBGCP4Q9UGJ1 667 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 LNPEPQ9UIQ6 1025 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 CACNA1FO60840 1977 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 IGSF6O95976 241 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 MSH3P20585 1137 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 CD52P31358 61 aa14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 MSLNQ13421 630 aaPredicted RBP14.48□□□□□ -0.09
PCDHB16-201ENST00000609684 RNF43Q68DV7 783 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms