RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 NCDNQ9UBB6 729 aa14.66□□□□□ -0.06
HDDC2-209ENST00000609477 IP6K2Q9UHH9 426 aa14.66□□□□□ -0.06
HDDC2-209ENST00000609477 WDR87Q6ZQQ6 2873 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 MYO1FO00160 1098 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 FGF10O15520 208 aaPredicted RBP14.65□□□□□ -0.06
HDDC2-209ENST00000609477 ATP9BO43861 1147 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 RNASEH1O60930 286 aaKnown RBP14.65□□□□□ -0.06
HDDC2-209ENST00000609477 IGLV3-19P01714 112 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 ACADMP11310 421 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 CLCN6P51797 869 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 COPAP53621 1224 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 GFPT1Q06210 699 aaPredicted RBP14.65□□□□□ -0.06
HDDC2-209ENST00000609477 ZNF252P-AS1Q0IIN9 211 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 SEMA3BQ13214 749 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 SRSF5Q13243 272 aaKnown RBP14.65□□□□□ -0.06
HDDC2-209ENST00000609477 BOLA3Q53S33 107 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 PMS2CLQ68D20 193 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 RWDD4Q6NW29 188 aaKnown RBP14.65□□□□□ -0.06
HDDC2-209ENST00000609477 NLRP14Q86W24 1093 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 GAS2L3Q86XJ1 694 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 FAM160A2Q8N612 972 aaPredicted RBP14.65□□□□□ -0.06
HDDC2-209ENST00000609477 NUP85Q9BW27 656 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 MAGEH1Q9H213 219 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 PRSS16Q9NQE7 514 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 USP36Q9P275 1121 aaKnown RBP14.65□□□□□ -0.06
HDDC2-209ENST00000609477 INTUQ9ULD6 942 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 USP18Q9UMW8 372 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 HS3ST2Q9Y278 367 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 SNX10Q9Y5X0 201 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 SPAG17Q6Q759 2223 aa14.65□□□□□ -0.06
HDDC2-209ENST00000609477 WASH4PA8MWX3 477 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 FAM72CH0Y354 149 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 MAP3K13O43283 966 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 LRCH4O75427 683 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 TMEM253P0C7T8 217 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 HLA-EP13747 358 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 MIPP30301 263 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 HCAR3P49019 387 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 GEMIN4P57678 1058 aaKnown RBP14.64□□□□□ -0.07
HDDC2-209ENST00000609477 YBEYP58557 167 aaPredicted RBP14.64□□□□□ -0.07
HDDC2-209ENST00000609477 GNA12Q03113 381 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 FAM72AQ5TYM5 149 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 FAM72DQ6L9T8 149 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 RETSATQ6NUM9 610 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 LPCAT2Q7L5N7 544 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 TFAP2DQ7Z6R9 452 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 KBTBD6Q86V97 674 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 FAM72BQ86X60 149 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 DNAAF5Q86Y56 855 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 TC2NQ8N9U0 490 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 OR52K2Q8NGK3 314 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 CHP1Q99653 195 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 RSPH9Q9H1X1 276 aaPredicted RBP14.64□□□□□ -0.07
HDDC2-209ENST00000609477 SLCO3A1Q9UIG8 710 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 AP4E1Q9UPM8 1137 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 NEU3Q9UQ49 428 aa14.64□□□□□ -0.07
HDDC2-209ENST00000609477 ZNF292O60281 2723 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 ALOX15BO15296 676 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 EPN2O95208 641 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 EPHB2P29323 1055 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 CTSOP43234 321 aaPredicted RBP14.63□□□□□ -0.07
HDDC2-209ENST00000609477 ELAVL3Q14576 367 aaKnown RBP14.63□□□□□ -0.07
HDDC2-209ENST00000609477 TTC31Q49AM3 519 aaPredicted RBP14.63□□□□□ -0.07
HDDC2-209ENST00000609477 C9orf64Q5T6V5 341 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 ZNF776Q68DI1 518 aaPredicted RBP14.63□□□□□ -0.07
HDDC2-209ENST00000609477 KIAA1324Q6UXG2 1013 aaKnown RBP14.63□□□□□ -0.07
HDDC2-209ENST00000609477 USP30Q70CQ3 517 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 DSG4Q86SJ6 1040 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 CCDC170Q8IYT3 715 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 SH2D3CQ8N5H7 860 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 ARFGAP1Q8N6T3 406 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 RTL3Q8N8U3 475 aaKnown RBP14.63□□□□□ -0.07
HDDC2-209ENST00000609477 PTPRN2Q92932 1015 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 RPL10LQ96L21 214 aaKnown RBP14.63□□□□□ -0.07
HDDC2-209ENST00000609477 CCDC114Q96M63 670 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 PANX2Q96RD6 677 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 HINFPQ9BQA5 517 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 ACE2Q9BYF1 805 aaPredicted RBP14.63□□□□□ -0.07
HDDC2-209ENST00000609477 PCED1AQ9H1Q7 454 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 ANAPC7Q9UJX3 599 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 HPCAL4Q9UM19 191 aa14.63□□□□□ -0.07
HDDC2-209ENST00000609477 CHD5Q8TDI0 1954 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 IGHV1OR15-9A0A0B4J2B8 117 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 A0A0D9SEW6 157 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 ZSCAN5CA6NGD5 496 aaPredicted RBP14.62□□□□□ -0.07
HDDC2-209ENST00000609477 TTC34A8MYJ7 566 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 DCLK1O15075 740 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 CREB3O43889 395 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 RAMP2O60895 175 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 SIN3BO75182 1162 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 DNTTP04053 509 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 CD6P30203 668 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 HOXD12P35452 270 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 TPMTP51580 245 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 TPI1P60174 286 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 POLD3Q15054 466 aaPredicted RBP14.62□□□□□ -0.07
HDDC2-209ENST00000609477 RHOT2Q8IXI1 618 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 UMODL1-AS1Q8N2C9 162 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 PYROXD2Q8N2H3 581 aa14.62□□□□□ -0.07
HDDC2-209ENST00000609477 CADM4Q8NFZ8 388 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms