RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 LHX1P48742 406 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 CCT8P50990 548 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 TMPRSS3P57727 454 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 TAF10Q12962 218 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 TPD52L1Q16890 204 aaPredicted RBP12.73□□□□□ -0.37
HLA-F-230ENST00000606273 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 KCNT1Q5JUK3 1230 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 MIIPQ5JXC2 388 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 HES3Q5TGS1 186 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 FBXL19Q6PCT2 694 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 C4orf50Q6ZRC1 276 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 TMPRSS6Q8IU80 811 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 DHX40Q8IX18 779 aaKnown RBP12.73□□□□□ -0.37
HLA-F-230ENST00000606273 ADGRF2Q8IZF7 708 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 AOPEPQ8N6M6 819 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 TOP6BLQ8N6T0 577 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 FBXL13Q8NEE6 735 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 LMO3Q8TAP4 145 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 OSGEPQ9NPF4 335 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 DNAJC17Q9NVM6 304 aaKnown RBP12.73□□□□□ -0.37
HLA-F-230ENST00000606273 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 STON1Q9Y6Q2 735 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 SPTA1P02549 2419 aa12.73□□□□□ -0.37
HLA-F-230ENST00000606273 GOLGA4Q13439 2230 aaKnown RBP12.73□□□□□ -0.37
HLA-F-230ENST00000606273 CBX4O00257 560 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 LETM1O95202 739 aaPredicted RBP12.72□□□□□ -0.37
HLA-F-230ENST00000606273 LDOC1O95751 146 aaPredicted RBP12.72□□□□□ -0.37
HLA-F-230ENST00000606273 GHRHP01286 108 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 CISD3P0C7P0 127 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 PCSK1P29120 753 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 IL9RQ01113 521 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 MYL5Q02045 173 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 APBA1Q02410 837 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 LRMPQ12912 555 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 KCNJ12Q14500 433 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 TRIP4Q15650 581 aaPredicted RBP12.72□□□□□ -0.37
HLA-F-230ENST00000606273 ZNF667Q5HYK9 610 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 CAPN12Q6ZSI9 719 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 ZNF248Q8NDW4 579 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 WBP2Q969T9 261 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 XPO6Q96QU8 1125 aaKnown RBP12.72□□□□□ -0.37
HLA-F-230ENST00000606273 LGMNQ99538 433 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 DPEP3Q9H4B8 488 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 TM9SF3Q9HD45 589 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 ZFP64Q9NPA5 681 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 HMGXB4Q9UGU5 601 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 SH3BP1Q9Y3L3 701 aa12.72□□□□□ -0.37
HLA-F-230ENST00000606273 R3HCC1Q9Y3T6 440 aaKnown RBP12.72□□□□□ -0.37
HLA-F-230ENST00000606273 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.72□□□□□ -0.37
HLA-F-230ENST00000606273 COL5A1P20908 1838 aaPredicted RBP12.72□□□□□ -0.37
HLA-F-230ENST00000606273 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 COCHO43405 550 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 CACNG3O60359 315 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 STX10O60499 249 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 TACC1O75410 805 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 FGFR1OPO95684 399 aaKnown RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 PDGFRBP09619 1106 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 ATP1A3P13637 1013 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 ZNF18P17022 549 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 WARSP23381 471 aaKnown RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 ANXA13P27216 316 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 SOX18P35713 384 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 CTSKP43235 329 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 MTIF2P46199 727 aaKnown RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 GRIA4P48058 902 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 ZNF132P52740 706 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 UCNP55089 124 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 PSMC1P62191 440 aaKnown RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 TNNC1P63316 161 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 ORC1Q13415 861 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 STARD3Q14849 445 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 IQCB1Q15051 598 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 INAVAQ3KP66 663 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 TCP11X2Q5H9J9 407 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 BROXQ5VW32 411 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 DPH6Q7L8W6 267 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 CACTIN-AS1Q8N1I8 211 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 SNRNP27Q8WVK2 155 aaKnown RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 TAF4BQ92750 862 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 KAT5Q92993 513 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 MYLPFQ96A32 169 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 SIPA1Q96FS4 1042 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 NAF1Q96HR8 494 aaKnown RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 CNDP2Q96KP4 475 aaKnown RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 C8orf48Q96LL4 319 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 PCED1AQ9H1Q7 454 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 C6orf106Q9H6K1 298 aaPredicted RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 CRTAC1Q9NQ79 661 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 TAB2Q9NYJ8 693 aa12.71□□□□□ -0.37
HLA-F-230ENST00000606273 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.71□□□□□ -0.37
HLA-F-230ENST00000606273 PIEZO2Q9H5I5 2752 aa12.71□□□□□ -0.38
HLA-F-230ENST00000606273 COL12A1Q99715 3063 aa12.71□□□□□ -0.38
HLA-F-230ENST00000606273 A0A1B0GTQ1 180 aa12.7□□□□□ -0.38
HLA-F-230ENST00000606273 PMM2O15305 246 aa12.7□□□□□ -0.38
HLA-F-230ENST00000606273 DFNA5O60443 496 aa12.7□□□□□ -0.38
HLA-F-230ENST00000606273 CLSTN1O94985 981 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms