RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 IFNEQ86WN2 208 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 POU5F2Q8N7G0 328 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 CYGBQ8WWM9 190 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 PIK3R5Q8WYR1 880 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 NCF1BA6NI72 391 aaPredicted RBP11.28□□□□□ -0.6
ZNF558-207ENST00000601372 NCF1CA8MVU1 366 aaPredicted RBP11.28□□□□□ -0.6
ZNF558-207ENST00000601372 NCF1P14598 390 aaPredicted RBP11.28□□□□□ -0.6
ZNF558-207ENST00000601372 PTPN2P17706 415 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 EEF1DP29692 281 aaKnown RBP11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SERPINB8P50452 374 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 VCPIP1Q96JH7 1222 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 OLFM3Q96PB7 478 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 ZBTB18Q99592 522 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SAGE1Q9NXZ1 904 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 FAM237BA0A1B0GVD1 139 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 A0A1W2PQH9 124 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 ANGPT2O15123 496 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 KDM1AO60341 852 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 TLR5O60602 858 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SRP72O76094 671 aaKnown RBP11.28□□□□□ -0.6
ZNF558-207ENST00000601372 FLOT2Q14254 428 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 FUT11Q495W5 492 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SNX31Q8N9S9 440 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 EME1Q96AY2 570 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 OXCT2Q9BYC2 517 aaPredicted RBP11.28□□□□□ -0.6
ZNF558-207ENST00000601372 C2orf71A6NGG8 1288 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 AGRPO00253 132 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SYN3O14994 580 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 JCHAINP01591 159 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SEC13P55735 322 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 NOMO3P69849 1222 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SMARCB1Q12824 385 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 TCEA2Q15560 299 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 FAM124AQ86V42 546 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 FICDQ9BVA6 458 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 ING2Q9H160 280 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 NRP1O14786 923 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 NUDT17P0C025 328 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 ATP6V1B1P15313 513 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 NRIP1P48552 1158 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 RABGGTBP53611 331 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 DCAF12L1Q5VU92 463 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 KCNT2Q6UVM3 1135 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 PIGZQ86VD9 579 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 SPPL2BQ8TCT7 592 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
ZNF558-207ENST00000601372 FCHO1O14526 889 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 TBC1D4O60343 1298 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 TRUB2O95900 331 aaKnown RBP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 C8AP07357 584 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 KBTBD12Q3ZCT8 623 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 MARC1Q5VT66 337 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 DOK6Q6PKX4 331 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 PHACTR4Q8IZ21 702 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 CHPFQ8IZ52 775 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 KREMEN2Q8NCW0 462 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 MFSD14AQ96MC6 490 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 CCDC90BQ9GZT6 254 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 C12orf65Q9H3J6 166 aaKnown RBP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 RBM22Q9NW64 420 aaKnown RBP eCLIP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 COL2A1P02458 1487 aaPredicted RBP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 MYH7P12883 1935 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 XPO1O14980 1071 aaKnown RBP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 CHRNB2P17787 502 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 GATMP50440 423 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 KPNB1Q14974 876 aaKnown RBP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 MORN1Q5T089 497 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 IZUMO2Q6UXV1 221 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 SUGP1Q8IWZ8 645 aaKnown RBP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 PPP1R16AQ96I34 528 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 CATSPER2Q96P56 530 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 SLCO1B3Q9NPD5 702 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 MRPL40Q9NQ50 206 aaKnown RBP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.27□□□□□ -0.6
ZNF558-207ENST00000601372 SFMBT1Q9UHJ3 866 aa11.27□□□□□ -0.6
ZNF558-207ENST00000601372 A0A0B4J269 797 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 ARHGAP10A1A4S6 786 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 PER2O15055 1255 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 SHOX2O60902 331 aaPredicted RBP11.27□□□□□ -0.61
ZNF558-207ENST00000601372 TFE3P19532 575 aaPredicted RBP11.27□□□□□ -0.61
ZNF558-207ENST00000601372 NOS2P35228 1153 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 PPP3CCP48454 512 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
ZNF558-207ENST00000601372 NAF1Q96HR8 494 aaKnown RBP11.27□□□□□ -0.61
ZNF558-207ENST00000601372 KCNK16Q96T55 309 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 PTPN18Q99952 460 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 GMIPQ9P107 970 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 USP12O75317 370 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 CNMDO75829 334 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 APODP05090 189 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 KRT16P08779 473 aa11.27□□□□□ -0.61
ZNF558-207ENST00000601372 RPL22P35268 128 aaKnown RBP11.27□□□□□ -0.61
ZNF558-207ENST00000601372 PLOD1Q02809 727 aaPredicted RBP11.27□□□□□ -0.61
ZNF558-207ENST00000601372 C4orf22Q6V702 233 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms