RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 FAM114A1Q8IWE2 563 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 FAM71AQ8IYT1 594 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 OR52K2Q8NGK3 314 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 FAM131CQ96AQ9 280 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 NPY6RQ99463 290 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 ELF4Q99607 663 aaPredicted RBP17.48■□□□□ 0.39
SCAF1-204ENST00000601038 KDM4CQ9H3R0 1056 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 NDST4Q9H3R1 872 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 SLC25A13Q9UJS0 675 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D30Q9Y2I9 924 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 OR51B4Q9Y5P0 310 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 AKAP13Q12802 2813 aa17.48■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3DA0A087WVF3 549 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3IA0A087WXS9 549 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3EA0A087X179 549 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3KA0A087X1G2 549 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3FA6NER0 549 aaPredicted RBP17.47■□□□□ 0.39
SCAF1-204ENST00000601038 GOLGA8CPA6NN73 597 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3LB9A6J9 549 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 SLC7A4O43246 635 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 LATO43561 262 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3HP0C7X1 549 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 IRAK1P51617 712 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 CDH4P55283 916 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 IL9RQ01113 521 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 PRAMEF14Q5SWL7 426 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 FAM46CQ5VWP2 391 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3GQ6DHY5 549 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3CQ6IPX1 549 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 DPY19L2P1Q6NXN4 242 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 TBC1D3Q8IZP1 549 aaPredicted RBP17.47■□□□□ 0.39
SCAF1-204ENST00000601038 GALNT15Q8N3T1 639 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 OR8D1Q8WZ84 308 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 SERAC1Q96JX3 654 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 CCDC86Q9H6F5 360 aaKnown RBP17.47■□□□□ 0.39
SCAF1-204ENST00000601038 WDCPQ9H6R7 721 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 PLCB1Q9NQ66 1216 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 PPM1HQ9ULR3 514 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 CHD6Q8TD26 2715 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 FAM208BQ5VWN6 2430 aa17.47■□□□□ 0.39
SCAF1-204ENST00000601038 WNT9AO14904 365 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 MCF2LO15068 1137 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 ALOX15BO15296 676 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 PNMA6AP0CW24 399 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-204ENST00000601038 ERCC5P28715 1186 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-204ENST00000601038 CDH5P33151 784 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-204ENST00000601038 CXCR3P49682 368 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 METAP1P53582 386 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 DLG2Q15700 870 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 VWA3BQ502W6 1294 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 SLC45A4Q5BKX6 768 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 MIIPQ5JXC2 388 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 BRMS1LQ5PSV4 323 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 OTUD1Q5VV17 481 aaPredicted RBP17.46■□□□□ 0.39
SCAF1-204ENST00000601038 C14orf80Q86SX3 495 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 TMEM35BQ8NCS4 154 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 NT5C3BQ969T7 300 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 TUBGCP2Q9BSJ2 902 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 TKTL2Q9H0I9 626 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 SIK2Q9H0K1 926 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 GDF3Q9NR23 364 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 PIGVQ9NUD9 493 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 TMEM51Q9NW97 253 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 ARHGEF38Q9NXL2 777 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCAF1-204ENST00000601038 FTSJ1Q9UET6 329 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 VPS28Q9UK41 221 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 SARDHQ9UL12 918 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 STAP1Q9ULZ2 295 aa17.46■□□□□ 0.39
SCAF1-204ENST00000601038 NYNRINQ9P2P1 1898 aaKnown RBP17.46■□□□□ 0.38
SCAF1-204ENST00000601038 TLR4O00206 839 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 PLK4O00444 970 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 YKT6O15498 198 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 PLRG1O43660 514 aaKnown RBP17.45■□□□□ 0.38
SCAF1-204ENST00000601038 RTN2O75298 545 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 ADCY5O95622 1261 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 F9P00740 461 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
SCAF1-204ENST00000601038 NUDT1P36639 197 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 SCNN1AP37088 669 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 GGCXP38435 758 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 GABRB2P47870 512 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 RNASE9P60153 205 aaKnown RBP17.45■□□□□ 0.38
SCAF1-204ENST00000601038 PPP2CBP62714 309 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 PPP2CAP67775 309 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 DRAP1Q14919 205 aaPredicted RBP17.45■□□□□ 0.38
SCAF1-204ENST00000601038 SHBQ15464 509 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 PRPF39Q86UA1 669 aaKnown RBP17.45■□□□□ 0.38
SCAF1-204ENST00000601038 GATAD2AQ86YP4 633 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 SH2D3CQ8N5H7 860 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 MFSD2AQ8NA29 543 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 SAP25Q8TEE9 199 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 C18orf8Q96DM3 657 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 PGAP3Q96FM1 320 aaPredicted RBP17.45■□□□□ 0.38
SCAF1-204ENST00000601038 PDCL3Q9H2J4 239 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 ARHGAP20Q9P2F6 1191 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 HS3ST2Q9Y278 367 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 ASPMQ8IZT6 3477 aa17.45■□□□□ 0.38
SCAF1-204ENST00000601038 C1QTNF3-AMACRE9PGA6 284 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms