RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 FAM221BA6H8Z2 402 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 GOLGA6L22H0YM25 854 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 ALOX15BO15296 676 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 DFNA5O60443 496 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 CBFA2T3O75081 653 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 IL1BP01584 269 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 CYP1A1P04798 512 aaPredicted RBP16.24■□□□□ 0.19
VRK3-221ENST00000600284 TFE3P19532 575 aaPredicted RBP16.24■□□□□ 0.19
VRK3-221ENST00000600284 FAM193AP78312 1265 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 KRT83P78385 493 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 KIF19Q2TAC6 998 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 FAM46CQ5VWP2 391 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 NCEH1Q6PIU2 408 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 ZNF683Q8IZ20 524 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 AADATQ8N5Z0 425 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 ANKRD20A12PQ8NF67 263 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 OR52K2Q8NGK3 314 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 CPA5Q8WXQ8 436 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 FAM131CQ96AQ9 280 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 SKA1Q96BD8 255 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 HAPLN3Q96S86 360 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 TBCBQ99426 244 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 IL21RQ9HBE5 538 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 FANCLQ9NW38 375 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 NOCTQ9UK39 431 aaKnown RBP16.24■□□□□ 0.19
VRK3-221ENST00000600284 VPS28Q9UK41 221 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 PCOLCE2Q9UKZ9 415 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 FNDC3AQ9Y2H6 1198 aaKnown RBP16.24■□□□□ 0.19
VRK3-221ENST00000600284 SLCO1B1Q9Y6L6 691 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 CHD8Q9HCK8 2581 aa16.24■□□□□ 0.19
VRK3-221ENST00000600284 IGLV3-10A0A075B6K4 115 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 FAM47DPA6NHR8 397 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 LRRC10BA6NIK2 292 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 I6L893 689 aaPredicted RBP16.23■□□□□ 0.19
VRK3-221ENST00000600284 MCF2LO15068 1137 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 VILLO15195 856 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 FLRT2O43155 660 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 SLC7A4O43246 635 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 GFPT2O94808 682 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 ENDOD1O94919 500 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 SOX5P35711 763 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 FLT3P36888 993 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 PSMD8P48556 350 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 IRAK1P51617 712 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 JAM2P57087 298 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 POLR2FP61218 127 aaKnown RBP16.23■□□□□ 0.19
VRK3-221ENST00000600284 CDR2Q01850 454 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 DLG2Q15700 870 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 ACCSLQ4AC99 568 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 UNQ6494/PRO21346Q6UXR6 183 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 TRIM72Q6ZMU5 477 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 ADAT2Q7Z6V5 191 aaKnown RBP16.23■□□□□ 0.19
VRK3-221ENST00000600284 SH2D3CQ8N5H7 860 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 OR8D1Q8WZ84 308 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 CAMK1GQ96NX5 476 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 C2orf49Q9BVC5 232 aaPredicted RBP16.23■□□□□ 0.19
VRK3-221ENST00000600284 MUC3BQ9H195 1237 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 ANLNQ9NQW6 1124 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 FAM207AQ9NSI2 230 aaPredicted RBP16.23■□□□□ 0.19
VRK3-221ENST00000600284 HS3ST2Q9Y278 367 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 MSRB2Q9Y3D2 182 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 SNX11Q9Y5W9 270 aa16.23■□□□□ 0.19
VRK3-221ENST00000600284 TMEM8BA6NDV4 472 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 GOLGA8SH3BPF8 625 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 HYAL3O43820 417 aaPredicted RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 PCDHGA12O60330 932 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 CNTN5O94779 1100 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 TOP3BO95985 862 aaKnown RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 RHOCP08134 193 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 VAV1P15498 845 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 ZNF18P17022 549 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 MMP8P22894 467 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 DRD3P35462 400 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 GGCXP38435 758 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 STAT1P42224 750 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 CTSKP43235 329 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 ADPRHP54922 357 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 MYL5Q02045 173 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 ALFQ53S48 1182 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 C6orf118Q5T5N4 469 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 NAA35Q5VZE5 725 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 RAB44Q7Z6P3 723 aaPredicted RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 OR14C36Q8NHC7 312 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 SETD7Q8WTS6 366 aaKnown RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 CDC6Q99741 560 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 TMEM121BQ9BXQ6 578 aaPredicted RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 ACE2Q9BYF1 805 aaPredicted RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 RETREG1Q9H6L5 497 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 LIMA1Q9UHB6 759 aaKnown RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 PPM1HQ9ULR3 514 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 APOBEC2Q9Y235 224 aaKnown RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 SIK3Q9Y2K2 1263 aa16.22■□□□□ 0.19
VRK3-221ENST00000600284 FARP1Q9Y4F1 1045 aaPredicted RBP16.22■□□□□ 0.19
VRK3-221ENST00000600284 C1QTNF9BB2RNN3 333 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 E9PAM4 449 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 C1QTNF3-AMACRE9PGA6 284 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 C1QTNF9P0C862 333 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 SPINK2P20155 84 aa16.21■□□□□ 0.19
VRK3-221ENST00000600284 NUDT1P36639 197 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms