RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ILVBLA1L0T0 632 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 PRPSAP2O60256 369 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 SIN3BO75182 1162 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 TMEM253P0C7T8 217 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 VAV1P15498 845 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 EPHB2P29323 1055 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 GNA12Q03113 381 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 SULT2A1Q06520 285 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 PIGHQ14442 188 aaPredicted RBP15.6■□□□□ 0.09
LIG1-219ENST00000600055 HNRNPA1L2Q32P51 320 aaKnown RBP15.6■□□□□ 0.09
LIG1-219ENST00000600055 PLK5Q496M5 336 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 TXNRD3NBQ6F5E7 133 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 DCLK2Q8N568 766 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 KDM1BQ8NB78 822 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 OR2T3Q8NH03 318 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 CTNNBL1Q8WYA6 563 aaPredicted RBP15.6■□□□□ 0.09
LIG1-219ENST00000600055 PPP1R9BQ96SB3 815 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 EPAS1Q99814 870 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 SPON2Q9BUD6 331 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 DUSP15Q9H1R2 295 aaPredicted RBP15.6■□□□□ 0.09
LIG1-219ENST00000600055 PRDM16Q9HAZ2 1276 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 TMEM248Q9NWD8 314 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 IP6K2Q9UHH9 426 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 VPS51Q9UID3 782 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 RAB23Q9ULC3 237 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 CYP8B1Q9UNU6 501 aa15.6■□□□□ 0.09
LIG1-219ENST00000600055 EML5Q05BV3 1969 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 MYO1FO00160 1098 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 MT-CO1P00395 513 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 PCK1P35558 622 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 ACVRL1P37023 503 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 MAPKAPK2P49137 400 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 ACAP1Q15027 740 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 SMTNL2Q2TAL5 461 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 KCNT1Q5JUK3 1230 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 C9orf64Q5T6V5 341 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 LINGO4Q6UY18 593 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.59■□□□□ 0.09
LIG1-219ENST00000600055 NIPA2Q8N8Q9 360 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 SPC24Q8NBT2 197 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 SIPA1Q96FS4 1042 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 ZWILCHQ9H900 591 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 ATP13A1Q9HD20 1204 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 OSGEPQ9NPF4 335 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 UVRAGQ9P2Y5 699 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 SLC25A13Q9UJS0 675 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 ACTL7AQ9Y615 435 aa15.59■□□□□ 0.09
LIG1-219ENST00000600055 IGHV1OR15-9A0A0B4J2B8 117 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 K7ERQ8 282 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 CBX4O00257 560 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
LIG1-219ENST00000600055 NNMTP40261 264 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 TPI1P60174 286 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 RPS14P62263 151 aaKnown RBP15.58■□□□□ 0.08
LIG1-219ENST00000600055 KRT83P78385 493 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 ACCSLQ4AC99 568 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 LAIR1Q6GTX8 287 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 ZNF783Q6ZMS7 281 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 STK40Q8N2I9 435 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 SH2D3CQ8N5H7 860 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 DEFB119Q8N690 84 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 RTL3Q8N8U3 475 aaKnown RBP15.58■□□□□ 0.08
LIG1-219ENST00000600055 DCAF4L2Q8NA75 395 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 SLC35G2Q8TBE7 412 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 FRS2Q8WU20 508 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 HSPH1Q92598 858 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 PRCCQ92733 491 aaPredicted RBP15.58■□□□□ 0.08
LIG1-219ENST00000600055 PTPRN2Q92932 1015 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 ARHGEF2Q92974 986 aaKnown RBP15.58■□□□□ 0.08
LIG1-219ENST00000600055 ZC3H10Q96K80 434 aaKnown RBP15.58■□□□□ 0.08
LIG1-219ENST00000600055 SPACA7Q96KW9 195 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 PANX2Q96RD6 677 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 C2orf49Q9BVC5 232 aaPredicted RBP15.58■□□□□ 0.08
LIG1-219ENST00000600055 NOL6Q9H6R4 1146 aaKnown RBP15.58■□□□□ 0.08
LIG1-219ENST00000600055 NCDNQ9UBB6 729 aa15.58■□□□□ 0.08
LIG1-219ENST00000600055 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 EDDM13A0A1B0GTR0 161 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 TARSL2A2RTX5 802 aaKnown RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 TMEM110-MUSTN1A8MSY1 372 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 WASH4PA8MWX3 477 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 EEF2KO00418 725 aaKnown RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 MAP3K13O43283 966 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 SMAD6O43541 496 aaKnown RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 ATP9BO43861 1147 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 ZNF217O75362 1048 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 ZMPSTE24O75844 475 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 RARAP10276 462 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 SRCP12931 536 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 GOT1P17174 413 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 SSR1P43307 286 aaKnown RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 VASPP50552 380 aaPredicted RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 ARF5P84085 180 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 SLC25A11Q02978 314 aaKnown RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 BYSLQ13895 437 aaKnown RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 DLG2Q15700 870 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 PPP6R3Q5H9R7 873 aaPredicted RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 PMS2CLQ68D20 193 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 IL31Q6EBC2 164 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 TMEFF1Q8IYR6 380 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms