RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 POM121L1PQ3SYA9 428 aa15.12■□□□□ 0.01
IRF3-223ENST00000599223 FBXL22Q6P050 247 aa15.12■□□□□ 0.01
IRF3-223ENST00000599223 OLFML1Q6UWY5 402 aa15.12■□□□□ 0.01
IRF3-223ENST00000599223 FAM183BPQ6ZVS7 135 aa15.12■□□□□ 0.01
IRF3-223ENST00000599223 CCDC117Q8IWD4 279 aaPredicted RBP15.12■□□□□ 0.01
IRF3-223ENST00000599223 C1orf131Q8NDD1 294 aaKnown RBP15.12■□□□□ 0.01
IRF3-223ENST00000599223 HNRNPLLQ8WVV9 542 aaKnown RBP15.12■□□□□ 0.01
IRF3-223ENST00000599223 CRELD1Q96HD1 420 aa15.12■□□□□ 0.01
IRF3-223ENST00000599223 SERAC1Q96JX3 654 aa15.12■□□□□ 0.01
IRF3-223ENST00000599223 ANLNQ9NQW6 1124 aa15.12■□□□□ 0.01
IRF3-223ENST00000599223 DOCK4Q8N1I0 1966 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 I6L893 689 aaPredicted RBP15.11■□□□□ 0.01
IRF3-223ENST00000599223 ERBB2P04626 1255 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 NXPH1P58417 271 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 INAVAQ3KP66 663 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 AGBL4Q5VU57 503 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 Q6ZVU0 165 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 SND1Q7KZF4 910 aaKnown RBP eCLIP15.11■□□□□ 0.01
IRF3-223ENST00000599223 KANSL1Q7Z3B3 1105 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 C14orf80Q86SX3 495 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 SPATS2Q86XZ4 545 aaKnown RBP15.11■□□□□ 0.01
IRF3-223ENST00000599223 GALNT15Q8N3T1 639 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 ATP6V0D2Q8N8Y2 350 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 SHC3Q92529 594 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 SPAG5Q96R06 1193 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 CAAP1Q9H8G2 361 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 ARHGAP20Q9P2F6 1191 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 VANGL2Q9ULK5 521 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 CA5BQ9Y2D0 317 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 OR51B4Q9Y5P0 310 aa15.11■□□□□ 0.01
IRF3-223ENST00000599223 ENC1O14682 589 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 HSF2BPO75031 334 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 TFE3P19532 575 aaPredicted RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 MAT2AP31153 395 aaKnown RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 USP8P40818 1118 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 ACADVLP49748 655 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 PLK1P53350 603 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 AUHQ13825 339 aaKnown RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 PTPN20Q4JDL3 420 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 SOWAHCQ53LP3 525 aaPredicted RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 TTC39BQ5VTQ0 682 aaPredicted RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 SFMBT2Q5VUG0 894 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 ENOSF1Q7L5Y1 443 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 IRF2BP1Q8IU81 584 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 EID2Q8N6I1 236 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 CNDP2Q96KP4 475 aaKnown RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 PPP1R13BQ96KQ4 1090 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 RPRD1AQ96P16 312 aaPredicted RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 BBC3Q96PG8 261 aaPredicted RBP15.1■□□□□ 0.01
IRF3-223ENST00000599223 SIX2Q9NPC8 291 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 PLCB1Q9NQ66 1216 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 GDF3Q9NR23 364 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.1■□□□□ 0.013e-8■□□□□ 10.2
IRF3-223ENST00000599223 APEX2Q9UBZ4 518 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 HS3ST4Q9Y661 456 aa15.1■□□□□ 0.01
IRF3-223ENST00000599223 TDRD6O60522 2096 aaKnown RBP15.09■□□□□ 0.01
IRF3-223ENST00000599223 FAM170AA1A519 330 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 TLR4O00206 839 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 RNF103O00237 685 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 PLRG1O43660 514 aaKnown RBP15.09■□□□□ 0.01
IRF3-223ENST00000599223 ATP9BO43861 1147 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 DFNA5O60443 496 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 PAGE1O75459 146 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 DAB1O75553 588 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 ITGAVP06756 1048 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 ABCB4P21439 1286 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 CCR1P32246 355 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 TAS2R38P59533 333 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 CDK17Q00537 523 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 CNTN1Q12860 1018 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 BNIP3Q12983 259 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 NME3Q13232 169 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 SLC12A1Q13621 1099 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 RABGAP1LQ5R372 815 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 NAPEPLDQ6IQ20 393 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 PSMB7Q99436 277 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 FEM1AQ9BSK4 669 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 SCUBE2Q9NQ36 999 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 ASNSD1Q9NWL6 643 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 PCDHGC3Q9UN70 934 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 SNX10Q9Y5X0 201 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 ASXL3Q9C0F0 2248 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 PTPRQQ9UMZ3 2332 aa15.09■□□□□ 0.01
IRF3-223ENST00000599223 TBC1D3DA0A087WVF3 549 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3IA0A087WXS9 549 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3EA0A087X179 549 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3KA0A087X1G2 549 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3FA6NER0 549 aaPredicted RBP15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3LB9A6J9 549 aa15.08■□□□□ 0
IRF3-223ENST00000599223 SNAP91O60641 907 aa15.08■□□□□ 0
IRF3-223ENST00000599223 RFPL3O75679 317 aa15.08■□□□□ 0
IRF3-223ENST00000599223 CNTN5O94779 1100 aa15.08■□□□□ 0
IRF3-223ENST00000599223 CTSLP07711 333 aa15.08■□□□□ 0
IRF3-223ENST00000599223 GLI1P08151 1106 aa15.08■□□□□ 0
IRF3-223ENST00000599223 TBC1D3HP0C7X1 549 aa15.08■□□□□ 0
IRF3-223ENST00000599223 PON1P27169 355 aa15.08■□□□□ 0
IRF3-223ENST00000599223 VASPP50552 380 aaPredicted RBP15.08■□□□□ 0
IRF3-223ENST00000599223 SULT2A1Q06520 285 aa15.08■□□□□ 0
IRF3-223ENST00000599223 SFSWAPQ12872 951 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms