RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 DDX50Q9BQ39 737 aaKnown RBP23.9■■□□□ 1.42
SYMPK-212ENST00000598896 NSUN3Q9H649 340 aaKnown RBP23.9■■□□□ 1.42
SYMPK-212ENST00000598896 ETNK1Q9HBU6 452 aa23.9■■□□□ 1.42
SYMPK-212ENST00000598896 DNAJC17Q9NVM6 304 aaKnown RBP23.9■■□□□ 1.42
SYMPK-212ENST00000598896 CDH22Q9UJ99 828 aa23.9■■□□□ 1.42
SYMPK-212ENST00000598896 MRPS23Q9Y3D9 190 aaKnown RBP23.9■■□□□ 1.42
SYMPK-212ENST00000598896 ZNF197O14709 1029 aa23.89■■□□□ 1.41
SYMPK-212ENST00000598896 RAMP2O60895 175 aa23.89■■□□□ 1.41
SYMPK-212ENST00000598896 KCNJ11Q14654 390 aa23.89■■□□□ 1.41
SYMPK-212ENST00000598896 ARHGEF18Q6ZSZ5 1173 aa23.89■■□□□ 1.41
SYMPK-212ENST00000598896 PCGF5Q86SE9 256 aa23.89■■□□□ 1.41
SYMPK-212ENST00000598896 PPP2R3CQ969Q6 453 aa23.89■■□□□ 1.41
SYMPK-212ENST00000598896 FERMT1Q9BQL6 677 aa23.89■■□□□ 1.41
SYMPK-212ENST00000598896 APOL5Q9BWW9 433 aa23.89■■□□□ 1.41
SYMPK-212ENST00000598896 F5H423 210 aaPredicted RBP23.88■■□□□ 1.41
SYMPK-212ENST00000598896 GOLGA8MH3BSY2 632 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 OPHN1O60890 802 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 PPFIA2O75334 1257 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 STK10O94804 968 aaKnown RBP23.88■■□□□ 1.41
SYMPK-212ENST00000598896 NUMBP49757 651 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 RGS19P49795 217 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 RARS2Q5T160 578 aaKnown RBP23.88■■□□□ 1.41
SYMPK-212ENST00000598896 CCDC25Q86WR0 208 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 ZCCHC9Q8N567 271 aaKnown RBP23.88■■□□□ 1.41
SYMPK-212ENST00000598896 TDP1Q9NUW8 608 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 IPO11Q9UI26 975 aaKnown RBP23.88■■□□□ 1.41
SYMPK-212ENST00000598896 ATP8A1Q9Y2Q0 1164 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 XIRP2A4UGR9 3374 aa23.88■■□□□ 1.41
SYMPK-212ENST00000598896 A0A1B0GVM2 712 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 TCAF2A6NFQ2 919 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 SOBPA7XYQ1 873 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 MTSS1O43312 755 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 CLDN11O75508 207 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 ACVRL1P37023 503 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 POLD3Q15054 466 aaPredicted RBP23.87■■□□□ 1.41
SYMPK-212ENST00000598896 UAP1Q16222 522 aaPredicted RBP23.87■■□□□ 1.41
SYMPK-212ENST00000598896 C4orf22Q6V702 233 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 HOOK3Q86VS8 718 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 DZANK1Q9NVP4 752 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 KLHL8Q9P2G9 620 aaPredicted RBP23.87■■□□□ 1.41
SYMPK-212ENST00000598896 A0A0D9SEW6 157 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 PARP15Q460N3 678 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 UBAP2Q5T6F2 1119 aaKnown RBP23.87■■□□□ 1.41
SYMPK-212ENST00000598896 TMEM184AQ6ZMB5 413 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 CHST9Q7L1S5 443 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 PID1Q7Z2X4 250 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 LRRC49Q8IUZ0 686 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 ZBTB9Q96C00 473 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 AGAP3Q96P47 875 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 RETREG1Q9H6L5 497 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 HPCAL4Q9UM19 191 aa23.87■■□□□ 1.41
SYMPK-212ENST00000598896 ARHGAP42A6NI28 874 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 J3KR12 359 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 CHADO15335 359 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 ZBTB24O43167 697 aaPredicted RBP23.86■■□□□ 1.41
SYMPK-212ENST00000598896 ZNF189O75820 626 aaPredicted RBP23.86■■□□□ 1.41
SYMPK-212ENST00000598896 PEX11BO96011 259 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 JCHAINP01591 159 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 CCNB1P14635 433 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 CD68P34810 354 aaPredicted RBP23.86■■□□□ 1.41
SYMPK-212ENST00000598896 TEX44Q53QW1 395 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 TTC39BQ5VTQ0 682 aaPredicted RBP23.86■■□□□ 1.41
SYMPK-212ENST00000598896 ARID3BQ8IVW6 561 aaPredicted RBP23.86■■□□□ 1.41
SYMPK-212ENST00000598896 CNTD1Q8N815 330 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 ZNF510Q9Y2H8 683 aa23.86■■□□□ 1.41
SYMPK-212ENST00000598896 E2F8A0AVK6 867 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 MATN3O15232 486 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 TBL1XO60907 577 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 PSMB4P28070 264 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 HSD17B3P37058 310 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 MAGEA6P43360 314 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 YBEYP58557 167 aaPredicted RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 IFI35P80217 286 aaPredicted RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 SERINC3Q13530 473 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 CXorf57Q6NSI4 855 aaKnown RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 SYCE2Q6PIF2 218 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 CPXM2Q8N436 756 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 EFHBQ8N7U6 833 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 USP33Q8TEY7 942 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 ARHGEF2Q92974 986 aaKnown RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 BHMTQ93088 406 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 VAT1Q99536 393 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 GORASP1Q9BQQ3 440 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 TBC1D30Q9Y2I9 924 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 NUP210Q8TEM1 1887 aaPredicted RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 NDC80O14777 642 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 APRTP07741 180 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 GNA12Q03113 381 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 SEMA5AQ13591 1074 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 TIGD7Q6NT04 549 aaPredicted RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 TDRD5Q8NAT2 981 aaKnown RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 HJURPQ8NCD3 748 aaPredicted RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 TMA16Q96EY4 203 aaKnown RBP23.85■■□□□ 1.41
SYMPK-212ENST00000598896 TEKT5Q96M29 485 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 IL12RB2Q99665 862 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 EPB41L4BQ9H329 900 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 IGSF9Q9P2J2 1179 aa23.85■■□□□ 1.41
SYMPK-212ENST00000598896 PRRC2BQ5JSZ5 2229 aaKnown RBP23.84■■□□□ 1.41
SYMPK-212ENST00000598896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.84■■□□□ 1.41
SYMPK-212ENST00000598896 PMS2P54278 862 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms