RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 HLA-EP13747 358 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 PRKCHP24723 683 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 HOXA6P31267 233 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 NNMTP40261 264 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 CTSOP43234 321 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 ZNF135P52742 658 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 KRT83P78385 493 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 SLC25A11Q02978 314 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 DMWDQ09019 674 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 ENPP2Q13822 863 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 TCEAL1Q15170 157 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 PTPRNQ16849 979 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 ANO7Q6IWH7 933 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 ZC3H14Q6PJT7 736 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 KIAA1328Q86T90 577 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 NLRP14Q86W24 1093 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 RTL3Q8N8U3 475 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 ACRBPQ8NEB7 543 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 OR7D4Q8NG98 312 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 TEKT4Q8WW24 435 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 ALG14Q96F25 216 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 SPON2Q9BUD6 331 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 TFR2Q9UP52 801 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 OR51B4Q9Y5P0 310 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 SPAG17Q6Q759 2223 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 A0A0D9SEW6 157 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 H3BRJ5 948 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 ETFBP38117 255 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 ARL4AP40617 200 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 GNA12Q03113 381 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 TXNRD3NBQ6F5E7 133 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 LONP2Q86WA8 852 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 CPNE8Q86YQ8 564 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 PGBD3Q8N328 593 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 ZNF366Q8N895 744 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 HMGB4Q8WW32 186 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 ATRIPQ8WXE1 791 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 ANP32BQ92688 251 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 RPL10LQ96L21 214 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 C2orf49Q9BVC5 232 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 ATP13A1Q9HD20 1204 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 NDFIP2Q9NV92 336 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 DONSONQ9NYP3 566 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 PCDHGA2Q9Y5H1 932 aa20.16■□□□□ 0.82
SHKBP1-214ENST00000597396 RIF1Q5UIP0 2472 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 A0A0A6YYK5 440 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 A0A1W2PQF6 199 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 AXIN1O15169 862 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 RAMP2O60895 175 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 GOT1P17174 413 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 STK19P49842 368 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 VAV2P52735 878 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 KRT81Q14533 505 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 DPYSL2Q16555 572 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 ZFYVE27Q5T4F4 411 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 IL31Q6EBC2 164 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 KIAA1211LQ6NV74 962 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 WDR5BQ86VZ2 330 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 TXLNBQ8N3L3 684 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 DCAF4L2Q8NA75 395 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 CCDC112Q8NEF3 446 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 NELL1Q92832 810 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 MRGPRX3Q96LB0 322 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 PSMB7Q99436 277 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 TMEM245Q9H330 911 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 SUN2Q9UH99 717 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 REXO2Q9Y3B8 237 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 R4GN57 208 aa20.15■□□□□ 0.82
SHKBP1-214ENST00000597396 PLXND1Q9Y4D7 1925 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 CCDC163A0A0D9SF12 145 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 WASH4PA8MWX3 477 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 NRDCO43847 1150 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 SNAP91O60641 907 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 KRT7P08729 469 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 HADHBP55084 474 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 CDH6P55285 790 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 TAS2R40P59535 323 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 RFX8Q6ZV50 586 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 ZNF354CQ86Y25 554 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 KDM1BQ8NB78 822 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 ZBTB44Q8NCP5 570 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 MDGA1Q8NFP4 955 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 MYO19Q96H55 970 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 DESI2Q9BSY9 194 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 TPSD1Q9BZJ3 242 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 MAGEH1Q9H213 219 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 CWC15Q9P013 229 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 EBF1Q9UH73 591 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 VPS51Q9UID3 782 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 SHROOM3Q8TF72 1996 aa20.14■□□□□ 0.81
SHKBP1-214ENST00000597396 RCCD1A6NED2 376 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 CBX4O00257 560 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 SPOPO43791 374 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 SLC1A1P43005 524 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 HCAR3P49019 387 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 NAP1L1P55209 391 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 POLD3Q15054 466 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 RASSF3Q86WH2 238 aa20.13■□□□□ 0.81
SHKBP1-214ENST00000597396 ARHGEF2Q92974 986 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms