RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 CCDC50Q8IVM0 306 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 CCDC117Q8IWD4 279 aaPredicted RBP15.9■□□□□ 0.14
SMCO4-206ENST00000596676 CCDC105Q8IYK2 499 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 RCOR2Q8IZ40 523 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 TRIM58Q8NG06 486 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 PJA1Q8NG27 643 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 EXD1Q8NHP7 514 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 ARHGEF2Q92974 986 aaKnown RBP15.9■□□□□ 0.14
SMCO4-206ENST00000596676 HMCESQ96FZ2 354 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 RPL10LQ96L21 214 aaKnown RBP15.9■□□□□ 0.14
SMCO4-206ENST00000596676 ALS2CR12Q96Q35 445 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 WDR24Q96S15 920 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 ZNF670Q9BS34 389 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 MUC3BQ9H195 1237 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 LRRC19Q9H756 370 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 C11orf16Q9NQ32 467 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 C2orf42Q9NWW7 574 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 ELOVL2Q9NXB9 296 aa15.9■□□□□ 0.14
SMCO4-206ENST00000596676 SAE1Q9UBE0 346 aaPredicted RBP15.9■□□□□ 0.14
SMCO4-206ENST00000596676 NYNRINQ9P2P1 1898 aaKnown RBP15.89■□□□□ 0.13
SMCO4-206ENST00000596676 hCG_1818297A0A087WSY0 165 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 ILVBLA1L0T0 632 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 RASA4BC9J798 803 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 FANCGO15287 622 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 RASA4O43374 803 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 MFSD11O43934 449 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 RNF40O75150 1001 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 ATP1A1P05023 1023 aaKnown RBP15.89■□□□□ 0.13
SMCO4-206ENST00000596676 DRD1P21728 446 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 CXCR5P32302 372 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 HTR7P34969 479 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 KIR2DL1P43626 348 aaPredicted RBP15.89■□□□□ 0.13
SMCO4-206ENST00000596676 MAPKAPK2P49137 400 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 PLK1P53350 603 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 GBE1Q04446 702 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 RPS6KA1Q15418 735 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 ODF2Q5BJF6 829 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 C6orf118Q5T5N4 469 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 AFMIDQ63HM1 303 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 LINGO4Q6UY18 593 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 SETD3Q86TU7 594 aaPredicted RBP15.89■□□□□ 0.13
SMCO4-206ENST00000596676 MAP7D3Q8IWC1 876 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 UMODL1-AS1Q8N2C9 162 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 PLD5Q8N7P1 536 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 ZNF366Q8N895 744 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 TRIM44Q96DX7 344 aaPredicted RBP15.89■□□□□ 0.13
SMCO4-206ENST00000596676 MSANTD3Q96H12 275 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 MTG2Q9H4K7 406 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 KCND1Q9NSA2 647 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 RCOR3Q9P2K3 495 aaPredicted RBP15.89■□□□□ 0.13
SMCO4-206ENST00000596676 VPS28Q9UK41 221 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 ZKSCAN5Q9Y2L8 839 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMCO4-206ENST00000596676 CHD5Q8TDI0 1954 aa15.89■□□□□ 0.13
SMCO4-206ENST00000596676 TCRBV7S2A1N4TA0A589 114 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 MIF4GDA9UHW6 222 aaKnown RBP15.88■□□□□ 0.13
SMCO4-206ENST00000596676 K7ERQ8 282 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 KIF5CO60282 957 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 RAMP2O60895 175 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 ZMPSTE24O75844 475 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 MT-CO1P00395 513 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 POLR2EP19388 210 aaKnown RBP15.88■□□□□ 0.13
SMCO4-206ENST00000596676 TNFRSF4P43489 277 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 PAPOLAP51003 745 aaKnown RBP15.88■□□□□ 0.13
SMCO4-206ENST00000596676 ZNF135P52742 658 aaPredicted RBP15.88■□□□□ 0.13
SMCO4-206ENST00000596676 GNG11P61952 73 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 POLD3Q15054 466 aaPredicted RBP15.88■□□□□ 0.13
SMCO4-206ENST00000596676 PTPRNQ16849 979 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 IL31Q6EBC2 164 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 TMCO3Q6UWJ1 677 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 AHI1Q8N157 1196 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 UBL4BQ8N7F7 174 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 WFIKKN2Q8TEU8 576 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 USP33Q8TEY7 942 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 TTC17Q96AE7 1141 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 PBXIP1Q96AQ6 731 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 HAUS1Q96CS2 278 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 RBM41Q96IZ5 413 aaKnown RBP15.88■□□□□ 0.13
SMCO4-206ENST00000596676 MRGPRX3Q96LB0 322 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 ACE2Q9BYF1 805 aaPredicted RBP15.88■□□□□ 0.13
SMCO4-206ENST00000596676 VPS51Q9UID3 782 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 SLCO3A1Q9UIG8 710 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 MRPS17Q9Y2R5 130 aaKnown RBP15.88■□□□□ 0.13
SMCO4-206ENST00000596676 SIT1Q9Y3P8 196 aa15.88■□□□□ 0.13
SMCO4-206ENST00000596676 J3KR12 359 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 CBX4O00257 560 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 DFFAO00273 331 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 KCNK3O14649 394 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 CST8O60676 142 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 CD160O95971 181 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 PECAM1P16284 738 aaPredicted RBP15.87■□□□□ 0.13
SMCO4-206ENST00000596676 PAFAH1B3Q15102 231 aaKnown RBP15.87■□□□□ 0.13
SMCO4-206ENST00000596676 TFDP3Q5H9I0 405 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 SLC9A4Q6AI14 798 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 ZNF354CQ86Y25 554 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 ALLCQ8N6M5 410 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 RPLP0P6Q8NHW5 317 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 MYO19Q96H55 970 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 FAM118BQ9BPY3 351 aa15.87■□□□□ 0.13
SMCO4-206ENST00000596676 MAK16Q9BXY0 300 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms