RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PPM1KQ8N3J5 372 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 ZNF843Q8N446 348 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 SPATA20Q8TB22 786 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 ALG14Q96F25 216 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 BTN2A3PQ96KV6 586 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 METTL14Q9HCE5 456 aaKnown RBP10.28□□□□□ -0.76
LIG1-209ENST00000596104 RMND1Q9NWS8 449 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 TJP2Q9UDY2 1190 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 CNTN6Q9UQ52 1028 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 CLCA2Q9UQC9 943 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 CFAP46Q8IYW2 2715 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 ZNF462Q96JM2 2506 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 TEX51A0A1B0GUA7 166 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 F5H5T6 163 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 SIGLEC6O43699 453 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 ATP9BO43861 1147 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 MAGEC1O60732 1142 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 SDC3O75056 442 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 TRUB2O95900 331 aaKnown RBP10.27□□□□□ -0.77
LIG1-209ENST00000596104 PLA2G2AP14555 144 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 NNMTP40261 264 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 ACADSBP45954 432 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 TAS2R38P59533 333 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 GCNT1Q02742 428 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 SULT2A1Q06520 285 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 CNTN1Q12860 1018 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 ZNF211Q13398 564 aaPredicted RBP10.27□□□□□ -0.77
LIG1-209ENST00000596104 DENND1BQ6P3S1 775 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 RRAGAQ7L523 313 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 GPR155Q7Z3F1 870 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 SPACA3Q8IXA5 215 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 FMR1NBQ8N0W7 255 aaPredicted RBP10.27□□□□□ -0.77
LIG1-209ENST00000596104 SLC25A45Q8N413 288 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 TMEM145Q8NBT3 493 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 OR52K2Q8NGK3 314 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 STK32AQ8WU08 396 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 OR8D1Q8WZ84 308 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 ERCC4Q92889 916 aaPredicted RBP10.27□□□□□ -0.77
LIG1-209ENST00000596104 KREMEN1Q96MU8 473 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 GSDMAQ96QA5 445 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 SCAND2PQ9GZW5 306 aaPredicted RBP10.27□□□□□ -0.77
LIG1-209ENST00000596104 GDPD2Q9HCC8 539 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 ST7Q9NRC1 585 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 PPM1HQ9ULR3 514 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 CA5BQ9Y2D0 317 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 OR51B4Q9Y5P0 310 aa10.27□□□□□ -0.77
LIG1-209ENST00000596104 A0A1B0GVM2 712 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 TCAF2A6NFQ2 919 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 KCNU1A8MYU2 1149 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 E5RJQ4 531 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 PRAMEF26H0Y7S4 382 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 CAPN9O14815 690 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 MCF2LO15068 1137 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 P4HA2O15460 535 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 MT-CO3P00414 261 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 GIMD1P0DJR0 217 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 DGKAP23743 735 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 ACTN2P35609 894 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 IRAK1P51617 712 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 E2F1Q01094 437 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 CCDC173Q0VFZ6 552 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 STAT4Q14765 748 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 MEA1Q16626 185 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 POM121L1PQ3SYA9 428 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 TTC39BQ5VTQ0 682 aaPredicted RBP10.26□□□□□ -0.77
LIG1-209ENST00000596104 FAM46CQ5VWP2 391 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 CDCP2Q5VXM1 449 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 DSG4Q86SJ6 1040 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 TMEM110Q86TL2 294 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 ATP6V0D2Q8N8Y2 350 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 OR4C6Q8NH72 309 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 CCDC34Q96HJ3 373 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 HIC2Q96JB3 615 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 TRIM62Q9BVG3 475 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 CAAP1Q9H8G2 361 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 POPDC2Q9HBU9 364 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 PREBQ9HCU5 417 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 KLHL11Q9NVR0 708 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.26□□□□□ -0.77
LIG1-209ENST00000596104 UCKL1Q9NWZ5 548 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 PCDHB1Q9Y5F3 818 aa10.26□□□□□ -0.77
LIG1-209ENST00000596104 ARID1BQ8NFD5 2236 aaPredicted RBP10.26□□□□□ -0.77
LIG1-209ENST00000596104 C1QTNF3-AMACRE9PGA6 284 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 ALOX15BO15296 676 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 OXCT1P55809 520 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 YWHAZP63104 245 aaKnown RBP10.25□□□□□ -0.77
LIG1-209ENST00000596104 NUCB2P80303 420 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 CENPCQ03188 943 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 TAF5Q15542 800 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 DLG2Q15700 870 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 SETMARQ53H47 684 aaPredicted RBP10.25□□□□□ -0.77
LIG1-209ENST00000596104 PIP5KL1Q5T9C9 394 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 TTI2Q6NXR4 508 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 FBXL22Q6P050 247 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 KDM7AQ6ZMT4 941 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 Q6ZVU0 165 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 EHBP1Q8NDI1 1231 aa10.25□□□□□ -0.77
LIG1-209ENST00000596104 COL26A1Q96A83 441 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms