RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 TMEM248Q9NWD8 314 aa22.49■■□□□ 1.19
HOMER3-206ENST00000594439 GPATCH2LQ9NWQ4 482 aa22.49■■□□□ 1.19
HOMER3-206ENST00000594439 PCSK1NQ9UHG2 260 aa22.49■■□□□ 1.19
HOMER3-206ENST00000594439 MBD1Q9UIS9 605 aaPredicted RBP22.49■■□□□ 1.19
HOMER3-206ENST00000594439 THADAQ6YHU6 1953 aa22.49■■□□□ 1.19
HOMER3-206ENST00000594439 SDK1Q7Z5N4 2213 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 A0A0D9SEW6 157 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 H2AFZP0C0S5 128 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 BYSLQ13895 437 aaKnown RBP22.48■■□□□ 1.19
HOMER3-206ENST00000594439 ACAP1Q15027 740 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 H2AFVQ71UI9 128 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.48■■□□□ 1.19
HOMER3-206ENST00000594439 METTL3Q86U44 580 aaKnown RBP22.48■■□□□ 1.19
HOMER3-206ENST00000594439 C11orf74Q86VG3 221 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 OR7D4Q8NG98 312 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 BTBD6Q96KE9 485 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 SPACA7Q96KW9 195 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 NCAPGQ9BPX3 1015 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 ANP32EQ9BTT0 268 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 SNRNP25Q9BV90 132 aaKnown RBP22.48■■□□□ 1.19
HOMER3-206ENST00000594439 CD93Q9NPY3 652 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 NDFIP2Q9NV92 336 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 ANAPC7Q9UJX3 599 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 AP4E1Q9UPM8 1137 aa22.48■■□□□ 1.19
HOMER3-206ENST00000594439 USP34Q70CQ2 3546 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 SNAP91O60641 907 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 SIN3BO75182 1162 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 PCK1P35558 622 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 MAPKAPK2P49137 400 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 GNA12Q03113 381 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 PIGHQ14442 188 aaPredicted RBP22.47■■□□□ 1.19
HOMER3-206ENST00000594439 CA9Q16790 459 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 ERMARDQ5T6L9 678 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 DAB2IPQ5VWQ8 1189 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 DCLK2Q8N568 766 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 NIPA2Q8N8Q9 360 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 DCAF4L2Q8NA75 395 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 SIPA1Q96FS4 1042 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 EPAS1Q99814 870 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 FBRSQ9HAH7 460 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 NCDNQ9UBB6 729 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 IP6K2Q9UHH9 426 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 VPS51Q9UID3 782 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 SLC25A13Q9UJS0 675 aa22.47■■□□□ 1.19
HOMER3-206ENST00000594439 EP300Q09472 2414 aaPredicted RBP22.47■■□□□ 1.19
HOMER3-206ENST00000594439 IGHV1OR15-9A0A0B4J2B8 117 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 EDDM13A0A1B0GTR0 161 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 TARSL2A2RTX5 802 aaKnown RBP22.46■■□□□ 1.19
HOMER3-206ENST00000594439 CREB3O43889 395 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 PRPSAP2O60256 369 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 ZNF217O75362 1048 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 RETP07949 1114 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 TMEM253P0C7T8 217 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 KRT83P78385 493 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 C9orf64Q5T6V5 341 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 PMS2CLQ68D20 193 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 ZNF564Q8TBZ8 553 aaPredicted RBP22.46■■□□□ 1.19
HOMER3-206ENST00000594439 FRS2Q8WU20 508 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 CTNNBL1Q8WYA6 563 aaPredicted RBP22.46■■□□□ 1.19
HOMER3-206ENST00000594439 PRCCQ92733 491 aaPredicted RBP22.46■■□□□ 1.19
HOMER3-206ENST00000594439 LOXL4Q96JB6 756 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 C2orf49Q9BVC5 232 aaPredicted RBP22.46■■□□□ 1.19
HOMER3-206ENST00000594439 DHX35Q9H5Z1 703 aaKnown RBP22.46■■□□□ 1.19
HOMER3-206ENST00000594439 ITM2CQ9NQX7 267 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 USP36Q9P275 1121 aaKnown RBP22.46■■□□□ 1.19
HOMER3-206ENST00000594439 DNAI1Q9UI46 699 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 GMEB2Q9UKD1 530 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 USP18Q9UMW8 372 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 CYP8B1Q9UNU6 501 aa22.46■■□□□ 1.19
HOMER3-206ENST00000594439 CEP192Q8TEP8 1941 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 EIF3CLB5ME19 914 aaKnown RBP22.45■■□□□ 1.18
HOMER3-206ENST00000594439 ATP9BO43861 1147 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 ZMPSTE24O75844 475 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 RHOBTB1O94844 696 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 TCF4P15884 667 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 GLDCP23378 1020 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 IL1R2P27930 398 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 EPHB2P29323 1055 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 NNMTP40261 264 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 RPS14P62263 151 aaKnown RBP22.45■■□□□ 1.18
HOMER3-206ENST00000594439 ELF2Q15723 593 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 PSTKQ8IV42 348 aaKnown RBP22.45■■□□□ 1.18
HOMER3-206ENST00000594439 SH2D3CQ8N5H7 860 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 RTL3Q8N8U3 475 aaKnown RBP22.45■■□□□ 1.18
HOMER3-206ENST00000594439 PTPRN2Q92932 1015 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 KCTD15Q96SI1 283 aaPredicted RBP22.45■■□□□ 1.18
HOMER3-206ENST00000594439 EIF3CQ99613 913 aaKnown RBP22.45■■□□□ 1.18
HOMER3-206ENST00000594439 SPON2Q9BUD6 331 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 RSPH9Q9H1X1 276 aaPredicted RBP22.45■■□□□ 1.18
HOMER3-206ENST00000594439 CTTNBP2NLQ9P2B4 639 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 UVRAGQ9P2Y5 699 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 HS3ST2Q9Y278 367 aa22.45■■□□□ 1.18
HOMER3-206ENST00000594439 WASH4PA8MWX3 477 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 MYO1FO00160 1098 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 EPN2O95208 641 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 MT-CO1P00395 513 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 VAV1P15498 845 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 HTR7P34969 479 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 RALGAPA1Q6GYQ0 2036 aa22.44■■□□□ 1.18
HOMER3-206ENST00000594439 CACUL1Q86Y37 369 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms