RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DEUP1Q05D60 604 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 PPIL2Q13356 520 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 PAFAH1B3Q15102 231 aaKnown RBP16.85■□□□□ 0.29
LIG1-206ENST00000594067 CCDC153Q494R4 210 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 MMEL1Q495T6 779 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 SPATA31D4Q6ZUB0 917 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 RNF169Q8NCN4 708 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 NLGN2Q8NFZ4 835 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 DTNBP1Q96EV8 351 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 VTA1Q9NP79 307 aa16.85■□□□□ 0.29
LIG1-206ENST00000594067 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.85■□□□□ 0.29
LIG1-206ENST00000594067 CASQ2O14958 399 aaPredicted RBP16.84■□□□□ 0.29
LIG1-206ENST00000594067 ATP9BO43861 1147 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 PTPN3P26045 913 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 NOS2P35228 1153 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 SERPINB8P50452 374 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
LIG1-206ENST00000594067 DPYSQ14117 519 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 PDK3Q15120 406 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 HSP90AA5PQ58FG0 334 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 FBXL19Q6PCT2 694 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 SATL1Q86VE3 508 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
LIG1-206ENST00000594067 MAPK15Q8TD08 544 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 MFSD3Q96ES6 412 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 NPY6RQ99463 290 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 APOL2Q9BQE5 337 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 VANGL2Q9ULK5 521 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 PCDHB12Q9Y5F1 795 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 A0A096LPK6 155 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 H3BNX3 289 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 DCLK1O15075 740 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 MYL4P12829 197 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 RAG1P15918 1043 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 TRIP10Q15642 601 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 PABPC1LQ4VXU2 614 aaKnown RBP16.84■□□□□ 0.29
LIG1-206ENST00000594067 MAP3K21Q5TCX8 1036 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 UGT2A3Q6UWM9 527 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 PSTKQ8IV42 348 aaKnown RBP16.84■□□□□ 0.29
LIG1-206ENST00000594067 B3GALNT2Q8NCR0 500 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 ACVR1CQ8NER5 493 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 CDH19Q9H159 772 aa16.84■□□□□ 0.29
LIG1-206ENST00000594067 G3V2L1 256 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 GPR32O75388 356 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 OR6B1O95007 311 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 COX4I1P13073 169 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 CD1EP15812 388 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 ERCC2P18074 760 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 MAGEA12P43365 314 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 LIMK2P53671 638 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 TBL3Q12788 808 aaKnown RBP16.83■□□□□ 0.29
LIG1-206ENST00000594067 TBC1D25Q3MII6 688 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 CERCAMQ5T4B2 595 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 FASTKD5Q7L8L6 764 aaKnown RBP16.83■□□□□ 0.29
LIG1-206ENST00000594067 KBTBD6Q86V97 674 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.29
LIG1-206ENST00000594067 ZNF560Q96MR9 790 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 DUSP16Q9BY84 665 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 LRRC4Q9HBW1 653 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 ANLNQ9NQW6 1124 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 BFARQ9NZS9 450 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 PACSIN3Q9UKS6 424 aa16.83■□□□□ 0.29
LIG1-206ENST00000594067 ZCWPW2A0A1B0GU75 182 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 AP1G1O43747 822 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 HUS1O60921 280 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 SNAI1O95863 264 aaPredicted RBP16.83■□□□□ 0.28
LIG1-206ENST00000594067 CD4P01730 458 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 LTFP02788 710 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 AMHP03971 560 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 MMP3P08254 477 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 SMPD1P17405 629 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 SERPINB6P35237 376 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 TAF6P49848 677 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 CHN2P52757 468 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 ANKRD20A4Q4UJ75 823 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 EPGNQ6UW88 154 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 SHCBP1Q8NEM2 672 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 SLC7A14Q8TBB6 771 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 WNT8BQ93098 351 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 NT5C3BQ969T7 300 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 PPP1R36Q96LQ0 422 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 OR52B2Q96RD2 323 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 KATNBL1Q9H079 304 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 ADARB2Q9NS39 739 aaKnown RBP16.83■□□□□ 0.28
LIG1-206ENST00000594067 GDAP2Q9NXN4 497 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 ADAM28Q9UKQ2 775 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 STAP1Q9ULZ2 295 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 CDY2AQ9Y6F7 541 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 CDY1Q9Y6F8 540 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 SF3B1O75533 1304 aaKnown RBP eCLIP16.83■□□□□ 0.284e-6■■■■■ 81.2
LIG1-206ENST00000594067 GOLGA8QA0A0J9YX86 632 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 GOLGA8OA6NCC3 632 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.83■□□□□ 0.28
LIG1-206ENST00000594067 GOLGA8NF8WBI6 632 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 GOLGA8TH3BQL2 631 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 ZBTB24O43167 697 aaPredicted RBP16.83■□□□□ 0.28
LIG1-206ENST00000594067 AP2A1O95782 977 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 PGGT1BP53609 377 aa16.83■□□□□ 0.28
LIG1-206ENST00000594067 RPL26P61254 145 aaKnown RBP16.83■□□□□ 0.28
LIG1-206ENST00000594067 KLF10Q13118 480 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms