RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PARP15Q460N3 678 aa21.29■■□□□ 1
PNKP-203ENST00000593946 SPDYCQ5MJ68 293 aa21.29■■□□□ 1
PNKP-203ENST00000593946 CHST9Q7L1S5 443 aa21.29■■□□□ 1
PNKP-203ENST00000593946 CCDC25Q86WR0 208 aa21.29■■□□□ 1
PNKP-203ENST00000593946 C12orf76Q8N812 135 aaPredicted RBP21.29■■□□□ 1
PNKP-203ENST00000593946 PPP2R3CQ969Q6 453 aa21.29■■□□□ 1
PNKP-203ENST00000593946 HMCESQ96FZ2 354 aa21.29■■□□□ 1
PNKP-203ENST00000593946 PRO3102Q9H379 93 aa21.29■■□□□ 1
PNKP-203ENST00000593946 SH3BP1Q9Y3L3 701 aa21.29■■□□□ 1
PNKP-203ENST00000593946 A0A1B0GVM2 712 aa21.28■■□□□ 1
PNKP-203ENST00000593946 TCAF2A6NFQ2 919 aa21.28■■□□□ 1
PNKP-203ENST00000593946 ARHGAP42A6NI28 874 aa21.28■■□□□ 1
PNKP-203ENST00000593946 SCAMP3O14828 347 aaKnown RBP21.28■■□□□ 1
PNKP-203ENST00000593946 CLDN11O75508 207 aa21.28■■□□□ 1
PNKP-203ENST00000593946 HSD17B3P37058 310 aa21.28■■□□□ 1
PNKP-203ENST00000593946 IFI35P80217 286 aaPredicted RBP21.28■■□□□ 1
PNKP-203ENST00000593946 SEMA5AQ13591 1074 aa21.28■■□□□ 1
PNKP-203ENST00000593946 TEX44Q53QW1 395 aa21.28■■□□□ 1
PNKP-203ENST00000593946 FAXCQ5TGI0 409 aa21.28■■□□□ 1
PNKP-203ENST00000593946 TIGD7Q6NT04 549 aaPredicted RBP21.28■■□□□ 1
PNKP-203ENST00000593946 SMG9Q9H0W8 520 aaKnown RBP21.28■■□□□ 1
PNKP-203ENST00000593946 DZANK1Q9NVP4 752 aa21.28■■□□□ 1
PNKP-203ENST00000593946 IGSF9Q9P2J2 1179 aa21.28■■□□□ 1
PNKP-203ENST00000593946 IPO11Q9UI26 975 aaKnown RBP21.28■■□□□ 1
PNKP-203ENST00000593946 TRHDEQ9UKU6 1024 aa21.28■■□□□ 1
PNKP-203ENST00000593946 MATN3O15232 486 aa21.27■■□□□ 1
PNKP-203ENST00000593946 FDFT1P37268 417 aa21.27■■□□□ 1
PNKP-203ENST00000593946 PMS2P54278 862 aa21.27■■□□□ 1
PNKP-203ENST00000593946 GAD2Q05329 585 aa21.27■■□□□ 1
PNKP-203ENST00000593946 POLD3Q15054 466 aaPredicted RBP21.27■■□□□ 1
PNKP-203ENST00000593946 TMC5Q6UXY8 1006 aa21.27■■□□□ 1
PNKP-203ENST00000593946 MTERF4Q7Z6M4 381 aaKnown RBP21.27■■□□□ 1
PNKP-203ENST00000593946 RELL1Q8IUW5 271 aa21.27■■□□□ 1
PNKP-203ENST00000593946 FATE1Q969F0 183 aa21.27■■□□□ 1
PNKP-203ENST00000593946 EXOC4Q96A65 974 aa21.27■■□□□ 1
PNKP-203ENST00000593946 PHACTR1Q9C0D0 580 aa21.27■■□□□ 1
PNKP-203ENST00000593946 PIDD1Q9HB75 910 aa21.27■■□□□ 1
PNKP-203ENST00000593946 KLHL8Q9P2G9 620 aaPredicted RBP21.27■■□□□ 1
PNKP-203ENST00000593946 CCL26Q9Y258 94 aa21.27■■□□□ 1
PNKP-203ENST00000593946 TSPAN3O60637 253 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 CCNB1P14635 433 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 CEBPBP17676 345 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 PARP6Q2NL67 630 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 CEP128Q6ZU80 1094 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 PID1Q7Z2X4 250 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 CPXM2Q8N436 756 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 SH3RF2Q8TEC5 729 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 USP13Q92995 863 aaPredicted RBP21.26■□□□□ 0.99
PNKP-203ENST00000593946 TEKT5Q96M29 485 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 RBM15Q96T37 977 aaKnown RBP eCLIP21.26■□□□□ 0.997e-9■■■□□ 16.1
PNKP-203ENST00000593946 IL12RB2Q99665 862 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 DNAJC17Q9NVM6 304 aaKnown RBP21.26■□□□□ 0.99
PNKP-203ENST00000593946 MYOFQ9NZM1 2061 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 E2F8A0AVK6 867 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 GOLGA8MH3BSY2 632 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 APRTP07741 180 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 TPSB2P20231 275 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 SERINC3Q13530 473 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 TPSAB1Q15661 275 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 POTEHQ6S545 545 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 BBS7Q8IWZ6 715 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 IQCKQ8N0W5 287 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 HJURPQ8NCD3 748 aaPredicted RBP21.26■□□□□ 0.99
PNKP-203ENST00000593946 UBLCP1Q8WVY7 318 aaPredicted RBP21.26■□□□□ 0.99
PNKP-203ENST00000593946 MAML1Q92585 1016 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 ZNF419Q96HQ0 510 aaPredicted RBP21.26■□□□□ 0.99
PNKP-203ENST00000593946 MAGEH1Q9H213 219 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 EPB41L4BQ9H329 900 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 PABPC3Q9H361 631 aaKnown RBP21.26■□□□□ 0.99
PNKP-203ENST00000593946 SEMA4AQ9H3S1 761 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 NSUN3Q9H649 340 aaKnown RBP21.26■□□□□ 0.99
PNKP-203ENST00000593946 TDP1Q9NUW8 608 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 TBC1D30Q9Y2I9 924 aa21.26■□□□□ 0.99
PNKP-203ENST00000593946 MRPS23Q9Y3D9 190 aaKnown RBP21.26■□□□□ 0.99
PNKP-203ENST00000593946 ZBTB24O43167 697 aaPredicted RBP21.25■□□□□ 0.99
PNKP-203ENST00000593946 GLP2RO95838 553 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 PEX11BO96011 259 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 JCHAINP01591 159 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 PSMB4P28070 264 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 CD68P34810 354 aaPredicted RBP21.25■□□□□ 0.99
PNKP-203ENST00000593946 HIF1AQ16665 826 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 C6orf118Q5T5N4 469 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 ALS2CLQ60I27 953 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 TMEM184AQ6ZMB5 413 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 SETD3Q86TU7 594 aaPredicted RBP21.25■□□□□ 0.99
PNKP-203ENST00000593946 TTC16Q8NEE8 873 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 OR52K2Q8NGK3 314 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 AGAP3Q96P47 875 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 GBA3Q9H227 469 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 IGFLR1Q9H665 355 aa21.25■□□□□ 0.99
PNKP-203ENST00000593946 PRRC2BQ5JSZ5 2229 aaKnown RBP21.25■□□□□ 0.99
PNKP-203ENST00000593946 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 PRAMEF12O95522 483 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 ARL4CP56559 192 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 GNA12Q03113 381 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 HYAL1Q12794 435 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 ZNF177Q13360 481 aaPredicted RBP21.24■□□□□ 0.99
PNKP-203ENST00000593946 ANO4Q32M45 955 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 SYCP2LQ5T4T6 812 aa21.24■□□□□ 0.99
PNKP-203ENST00000593946 CFAP58Q5T655 872 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms