RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 NRG1Q02297 640 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 TRIM61Q5EBN2 209 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 STPG1Q5TH74 334 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 MANEALQ5VSG8 457 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 ZNF776Q68DI1 518 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 DNAJC24Q6P3W2 148 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 SLC23A3Q6PIS1 610 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 TFAP2DQ7Z6R9 452 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 SETD3Q86TU7 594 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 FAM124AQ86V42 546 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 DNAAF5Q86Y56 855 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 CADM4Q8NFZ8 388 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 FOXJ1Q92949 421 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 MCEEQ96PE7 176 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 OSBPL2Q9H1P3 480 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 PPARGC1AQ9UBK2 798 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 OR12D3Q9UGF7 316 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 VPS28Q9UK41 221 aa18.99■□□□□ 0.63
SHKBP1-202ENST00000593764 A0A0D9SEW6 157 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 A0A1W2PQJ5 194 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 FAM72CH0Y354 149 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 CDX4O14627 284 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 ATP9BO43861 1147 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 DNTTP04053 509 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 RHOCP08134 193 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 GZMAP12544 262 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 ACSL1P33121 698 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 KLHL30Q0D2K2 578 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 MAMLD1Q13495 774 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 ARL13BQ3SXY8 428 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 FAM72AQ5TYM5 149 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 FAM72DQ6L9T8 149 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 FAM72BQ86X60 149 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 STK40Q8N2I9 435 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 CCDC185Q8N715 623 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 DNASE2BQ8WZ79 361 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 EDEM2Q9BV94 578 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 MUC3BQ9H195 1237 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 IFNKQ9P0W0 207 aa18.98■□□□□ 0.63
SHKBP1-202ENST00000593764 METTL12A8MUP2 240 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 CCP110O43303 1012 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 SNAP91O60641 907 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 MT-CO1P00395 513 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 MAOBP27338 520 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 OR1E1P30953 314 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 NNMTP40261 264 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 OGDHQ02218 1023 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 CST6Q15828 149 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 DUOXA1Q1HG43 343 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 SYCP2LQ5T4T6 812 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 HGSNATQ68CP4 663 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 PLEKHA7Q6IQ23 1121 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 PPP1R2P3Q6NXS1 205 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 MMAAQ8IVH4 418 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 CEP76Q8TAP6 659 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 NTAN1Q96AB6 310 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 CNPY3Q9BT09 278 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 ZYG11BQ9C0D3 744 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 PABPC3Q9H361 631 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 CAPN10Q9HC96 672 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 SCML1Q9UN30 329 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 NEU3Q9UQ49 428 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 HS3ST2Q9Y278 367 aa18.97■□□□□ 0.63
SHKBP1-202ENST00000593764 ILVBLA1L0T0 632 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 MID1O15344 667 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 ATMINO43313 823 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 RNASEH1O60930 286 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 FTLP02792 175 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 PLEKP08567 350 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 SERPINF2P08697 491 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 SCAPQ12770 1279 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 DLG2Q15700 870 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 C6orf118Q5T5N4 469 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 DCAF12L1Q5VU92 463 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 USP30Q70CQ3 517 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 NLRP14Q86W24 1093 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 RGL4Q8IZJ4 473 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 SH2D3CQ8N5H7 860 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 OR7D4Q8NG98 312 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 SYN2Q92777 582 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 NUSAP1Q9BXS6 441 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 PCED1AQ9H1Q7 454 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 C6orf106Q9H6K1 298 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 FSCN3Q9NQT6 498 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 SERGEFQ9UGK8 458 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 VPS51Q9UID3 782 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 SLC25A13Q9UJS0 675 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 CAPN11Q9UMQ6 739 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 CACNA1EQ15878 2313 aa18.96■□□□□ 0.63
SHKBP1-202ENST00000593764 C4orf47A7E2U8 309 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 LRIG2O94898 1065 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 CFIP05156 583 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 SLC8A1P32418 973 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 KRT83P78385 493 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 ELAVL3Q14576 367 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 TTC31Q49AM3 519 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 WDR45BQ5MNZ6 344 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 DCUN1D2Q6PH85 259 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 ZNF783Q6ZMS7 281 aa18.95■□□□□ 0.62
SHKBP1-202ENST00000593764 SLFN11Q7Z7L1 901 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms