RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 BAG5Q9UL15 447 aa5.45□□□□□ -1.54
SMAD4-216ENST00000593223 SLC8A2Q9UPR5 921 aa5.45□□□□□ -1.54
SMAD4-216ENST00000593223 PCDHA10Q9Y5I2 948 aa5.45□□□□□ -1.54
SMAD4-216ENST00000593223 SPATA31A5Q5VU36 1347 aa5.45□□□□□ -1.54
SMAD4-216ENST00000593223 SPATA31A7Q8IWB4 1347 aa5.45□□□□□ -1.54
SMAD4-216ENST00000593223 NINLQ9Y2I6 1382 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 FAM135AQ9P2D6 1515 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-216ENST00000593223 SLC22A23A1A5C7 686 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 AGAP5A6NIR3 686 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 E5RJQ4 531 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 ATRNO75882 1429 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 LDHCP07864 332 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 CYP3A4P08684 503 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 TFEBP19484 476 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 SERPINA4P29622 427 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 HOXA7P31268 230 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-216ENST00000593223 PNLIPRP1P54315 467 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 SHC2P98077 582 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 LIPMQ5VYY2 423 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 ADGRF4Q8IZF3 695 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 TRAPPC12Q8WVT3 735 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 PCSK5Q92824 1860 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 RPL36ALQ969Q0 106 aaKnown RBP5.44□□□□□ -1.54
SMAD4-216ENST00000593223 P2RY11Q96G91 374 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 SIGLEC11Q96RL6 698 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 HTATIP2Q9BUP3 242 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 OSBPL5Q9H0X9 879 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-216ENST00000593223 MYLK2Q9H1R3 596 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 PPCSQ9HAB8 311 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 TMEM184CQ9NVA4 438 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 TRNAU1APQ9NX07 287 aaKnown RBP5.44□□□□□ -1.54
SMAD4-216ENST00000593223 UGGT1Q9NYU2 1555 aa5.44□□□□□ -1.54
SMAD4-216ENST00000593223 NAP1L2Q9ULW6 460 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-216ENST00000593223 MBD3L5A6NJ08 208 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-216ENST00000593223 C2CD4BA6NLJ0 364 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 IPO5O00410 1097 aaKnown RBP5.43□□□□□ -1.54
SMAD4-216ENST00000593223 ADAM10O14672 748 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 KRT38O76015 456 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 CNTN5O94779 1100 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 ALDOCP09972 364 aaKnown RBP5.43□□□□□ -1.54
SMAD4-216ENST00000593223 RFPL3SP0C7P2 107 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 TGM2P21980 687 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 GRK6P43250 576 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 PCP4P48539 62 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 RCAN1P53805 252 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 FOXL2P58012 376 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 GALNTL6Q49A17 601 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 Q4G0T1 1027 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 EARS2Q5JPH6 523 aaKnown RBP5.43□□□□□ -1.54
SMAD4-216ENST00000593223 TANGO2Q6ICL3 276 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 JMJD6Q6NYC1 403 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-216ENST00000593223 SYNE3Q6ZMZ3 975 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 ZNF793Q6ZN11 406 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 GALNT15Q8N3T1 639 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 FAM47BQ8NA70 645 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 CLEC4CQ8WTT0 213 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 GOLGA1Q92805 767 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 FAM167BQ9BTA0 163 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-216ENST00000593223 ERVK-5Q9HDB9 667 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 MLXIPLQ9NP71 852 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 SAYSD1Q9NPB0 183 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMAD4-216ENST00000593223 BTBD3Q9Y2F9 522 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 AHDC1Q5TGY3 1603 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-216ENST00000593223 ATP7AQ04656 1500 aa5.43□□□□□ -1.54
SMAD4-216ENST00000593223 MSH6P52701 1360 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 CYP3A7-CYP3A51PA0A087WV96 503 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 TTC36A6NLP5 189 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 H0Y3Z8 333 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 CYP19A1P11511 503 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 CYP3A7P24462 503 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 HOXD9P28356 352 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 SOX2P48431 317 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 ZNF81P51508 661 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 SSBP2P81877 361 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 CFHR1Q03591 330 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 KLF9Q13886 244 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 POSTNQ15063 836 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 ETFDHQ16134 617 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 CCDC96Q2M329 555 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 GLIPR1L2Q4G1C9 344 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 TTC22Q5TAA0 569 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 PXDC1Q5TGL8 231 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 ERAP2Q6P179 960 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 SHC4Q6S5L8 630 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 FAM57BQ71RH2 274 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 ANKRD13BQ86YJ7 626 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 FTSJ3Q8IY81 847 aaKnown RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 ADGRF3Q8IZF5 1079 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 NANOGP1Q8N7R0 232 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 SPATA5Q8NB90 893 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 BCAS4Q8TDM0 211 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 TSPAN18Q96SJ8 248 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 GATA5Q9BWX5 397 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 MOV10Q9HCE1 1003 aaKnown RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 TMEM45AQ9NWC5 275 aa5.42□□□□□ -1.54
SMAD4-216ENST00000593223 TUBA8Q9NY65 449 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 ZNF70Q9UC06 446 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms