RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 MINDY1Q8N5J2 469 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 NEK11Q8NG66 645 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 CPA5Q8WXQ8 436 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 RNF34Q969K3 372 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 NTAN1Q96AB6 310 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 PCDHB18PQ96TA0 734 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 PSMB7Q99436 277 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 KDM4CQ9H3R0 1056 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 C6orf106Q9H6K1 298 aaPredicted RBP15.28■□□□□ 0.04
SF3A2-207ENST00000592839 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 RTN4Q9NQC3 1192 aaKnown RBP15.28■□□□□ 0.04
SF3A2-207ENST00000592839 NEU3Q9UQ49 428 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 PCDHGB2Q9Y5G2 931 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 TP53BP1Q12888 1972 aaPredicted RBP15.27■□□□□ 0.04
SF3A2-207ENST00000592839 SPEGQ15772 3267 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.27■□□□□ 0.04
SF3A2-207ENST00000592839 A0A1W2PQC6 194 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 MEI4A8MW99 385 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 LATO43561 262 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 OPHN1O60890 802 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 IGHV4-34P06331 123 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 CD59P13987 128 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 CD27P26842 260 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 NNMTP40261 264 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 NOVA1P51513 510 aaKnown RBP15.27■□□□□ 0.04
SF3A2-207ENST00000592839 CCR5P51681 352 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 AFF3P51826 1226 aaKnown RBP15.27■□□□□ 0.04
SF3A2-207ENST00000592839 BNC1Q01954 994 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 UBXN1Q04323 297 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
SF3A2-207ENST00000592839 ZNF177Q13360 481 aaPredicted RBP15.27■□□□□ 0.04
SF3A2-207ENST00000592839 CLEC16AQ2KHT3 1053 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 ALFQ53S48 1182 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 RNF219Q5W0B1 726 aaPredicted RBP15.27■□□□□ 0.04
SF3A2-207ENST00000592839 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 MON1BQ7L1V2 547 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 DHX40Q8IX18 779 aaKnown RBP15.27■□□□□ 0.04
SF3A2-207ENST00000592839 RGL4Q8IZJ4 473 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 BAP1Q92560 729 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 BIRC7Q96CA5 298 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 OSBPL2Q9H1P3 480 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 PPM1HQ9ULR3 514 aa15.27■□□□□ 0.04
SF3A2-207ENST00000592839 PLXNA2O75051 1894 aa15.27■□□□□ 0.03
SF3A2-207ENST00000592839 ILVBLA1L0T0 632 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 E9PAM4 449 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 MCF2LO15068 1137 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 CNTN5O94779 1100 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 CALB1P05937 261 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 ATP1A3P13637 1013 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 GOT1P17174 413 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 DRD3P35462 400 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 STK19P49842 368 aaPredicted RBP15.26■□□□□ 0.03
SF3A2-207ENST00000592839 CCDC14Q49A88 953 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 C2CD6Q53TS8 623 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 PPP1R15BQ5SWA1 713 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 C6orf118Q5T5N4 469 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 PSAPL1Q6NUJ1 521 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 IRF2BP2Q7Z5L9 587 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 GLRX5Q86SX6 157 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 ZCCHC9Q8N567 271 aaKnown RBP15.26■□□□□ 0.03
SF3A2-207ENST00000592839 DEFB119Q8N690 84 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 OR2T34Q8NGX1 318 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 VCPIP1Q96JH7 1222 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 CFAP57Q96MR6 1250 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 C2orf49Q9BVC5 232 aaPredicted RBP15.26■□□□□ 0.03
SF3A2-207ENST00000592839 TTYH3Q9C0H2 523 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 MTG2Q9H4K7 406 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 METTL5Q9NRN9 209 aaKnown RBP15.26■□□□□ 0.03
SF3A2-207ENST00000592839 FBXL12Q9NXK8 326 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 SERGEFQ9UGK8 458 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 NCKAP1Q9Y2A7 1128 aa15.26■□□□□ 0.03
SF3A2-207ENST00000592839 COL5A1P20908 1838 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-207ENST00000592839 SYNJ2BP-COX16A0A087WUM0 186 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 A0A1B0GTH6 734 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 A0A1W2PPC4 97 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 MID1O15344 667 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 CBFA2T3O75081 653 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 ZMPSTE24O75844 475 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 CER1O95813 267 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 CCDC172P0C7W6 258 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 SRCP12931 536 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 FERP16591 822 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 MAOBP27338 520 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 SDC4P31431 198 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 SLC8A1P32418 973 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 ADRA1BP35368 520 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 NUDT1P36639 197 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 MAPK8P45983 427 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 NSFP46459 744 aaKnown RBP15.25■□□□□ 0.03
SF3A2-207ENST00000592839 ATXN3P54252 364 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-207ENST00000592839 GALCP54803 685 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 ADPRHP54922 357 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 AIF1P55008 147 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 HDAC4P56524 1084 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 RACK1P63244 317 aaKnown RBP15.25■□□□□ 0.03
SF3A2-207ENST00000592839 KRT83P78385 493 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 IQCB1Q15051 598 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 KLHL40Q2TBA0 621 aa15.25■□□□□ 0.03
SF3A2-207ENST00000592839 ANO6Q4KMQ2 910 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms