RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 MUC3BQ9H195 1237 aa10.2□□□□□ -0.78
TPM4-216ENST00000592822 CATSPERBQ9H7T0 1116 aa10.2□□□□□ -0.78
TPM4-216ENST00000592822 CACNA2D2Q9NY47 1150 aa10.2□□□□□ -0.78
TPM4-216ENST00000592822 VPS28Q9UK41 221 aa10.2□□□□□ -0.78
TPM4-216ENST00000592822 MMP17Q9ULZ9 603 aa10.2□□□□□ -0.78
TPM4-216ENST00000592822 ERVW-1Q9UQF0 538 aa10.2□□□□□ -0.78
TPM4-216ENST00000592822 MFHAS1Q9Y4C4 1052 aa10.2□□□□□ -0.78
TPM4-216ENST00000592822 STON1Q9Y6Q2 735 aa10.2□□□□□ -0.78
TPM4-216ENST00000592822 C3orf70A6NLC5 250 aaPredicted RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 K7ESF4 209 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 NPC1O15118 1278 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 DAPK3O43293 454 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 NRDCO43847 1150 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 SNAP91O60641 907 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 ZMPSTE24O75844 475 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 PAPSS2O95340 614 aaPredicted RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 ASLP04424 464 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 ATP5BP06576 529 aaKnown RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 TNNT1P13805 278 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 ERCC2P18074 760 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 GLDCP23378 1020 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 KDELR1P24390 212 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 PRKCHP24723 683 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 ARL4AP40617 200 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 IL12RB1P42701 662 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 CXCL12P48061 93 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 CCR3P51677 355 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 NUBP1P53384 320 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 ECT2LQ008S8 904 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 CCDC173Q0VFZ6 552 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 DPYSL3Q14195 570 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 PDK2Q15119 407 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 FNDC3BQ53EP0 1204 aaKnown RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 EOGTQ5NDL2 527 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 AFMIDQ63HM1 303 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 TSSK4Q6SA08 328 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 ZNF662Q6ZS27 426 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 TRMT11Q7Z4G4 463 aaKnown RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 RHOT1Q8IXI2 618 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 UMODL1-AS1Q8N2C9 162 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 DCAF4L2Q8NA75 395 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 KCTD6Q8NC69 237 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 KIAA1524Q8TCG1 905 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 ARHGEF2Q92974 986 aaKnown RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 ACDQ96AP0 544 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 RPL10LQ96L21 214 aaKnown RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 GABRG3Q99928 467 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 SPON2Q9BUD6 331 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 CALN1Q9BXU9 219 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 ACE2Q9BYF1 805 aaPredicted RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 TSGA10Q9BZW7 698 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 MAGEH1Q9H213 219 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 TMEM245Q9H330 911 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 PRMT8Q9NR22 394 aaPredicted RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 ETNK2Q9NVF9 386 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 RCOR3Q9P2K3 495 aaPredicted RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 VPS51Q9UID3 782 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 PLA2G4CQ9UP65 541 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 PPP2R2CQ9Y2T4 447 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 RAD54BQ9Y620 910 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 CAPN6Q9Y6Q1 641 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 CKAP5Q14008 2032 aa10.19□□□□□ -0.78
TPM4-216ENST00000592822 NYNRINQ9P2P1 1898 aaKnown RBP10.19□□□□□ -0.78
TPM4-216ENST00000592822 A0A1W2PQF6 199 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 LRRD1A4D1F6 860 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 DCLK1O15075 740 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 LAMTOR5O43504 91 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 PSTPIP1O43586 416 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 RAMP2O60895 175 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 PALMO75781 387 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 KRT1P04264 644 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 SRPRAP08240 638 aaKnown RBP10.18□□□□□ -0.78
TPM4-216ENST00000592822 TDGF1P13385 188 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 HLA-EP13747 358 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 HOXB2P14652 356 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 COL9A1P20849 921 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 MARCKSL1P49006 195 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 STK19P49842 368 aaPredicted RBP10.18□□□□□ -0.78
TPM4-216ENST00000592822 NDST2P52849 883 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 YBEYP58557 167 aaPredicted RBP10.18□□□□□ -0.78
TPM4-216ENST00000592822 SULT2A1Q06520 285 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 POLD3Q15054 466 aaPredicted RBP10.18□□□□□ -0.78
TPM4-216ENST00000592822 E2F5Q15329 346 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 CRY1Q16526 586 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 IFI16Q16666 785 aaKnown RBP10.18□□□□□ -0.78
TPM4-216ENST00000592822 ANKRD20A8PQ5CZ79 823 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 SDE2Q6IQ49 451 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 KIAA1211LQ6NV74 962 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 SERPINA13PQ6UXR4 307 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 ARHGAP12Q8IWW6 846 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 RNF10Q8N5U6 811 aaKnown RBP10.18□□□□□ -0.78
TPM4-216ENST00000592822 NPWQ8N729 165 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 NETO2Q8NC67 525 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 PCDH19Q8TAB3 1148 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 KRT35Q92764 455 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 FAF2Q96CS3 445 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 ERLEC1Q96DZ1 483 aa10.18□□□□□ -0.78
TPM4-216ENST00000592822 HMCESQ96FZ2 354 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms