RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 SERPING1P05155 500 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 RHOCP08134 193 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 CD6P30203 668 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 HNRNPH3P31942 346 aaKnown RBP18.71■□□□□ 0.59
DDX39A-212ENST00000590260 VASPP50552 380 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-212ENST00000590260 SEMA3BQ13214 749 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 BYSLQ13895 437 aaKnown RBP18.71■□□□□ 0.59
DDX39A-212ENST00000590260 SPDYCQ5MJ68 293 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 LRRC31Q6UY01 552 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 SETD3Q86TU7 594 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-212ENST00000590260 VSTM4Q8IW00 320 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 TOE1Q96GM8 510 aaKnown RBP18.71■□□□□ 0.59
DDX39A-212ENST00000590260 ZNF419Q96HQ0 510 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-212ENST00000590260 ZYG11BQ9C0D3 744 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 PARVAQ9NVD7 372 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 CNOT8Q9UFF9 292 aaKnown RBP18.71■□□□□ 0.59
DDX39A-212ENST00000590260 SERGEFQ9UGK8 458 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 FZD10Q9ULW2 581 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 LUC7L2Q9Y383 392 aaKnown RBP18.71■□□□□ 0.59
DDX39A-212ENST00000590260 TARSL2A2RTX5 802 aaKnown RBP18.7■□□□□ 0.58
DDX39A-212ENST00000590260 K7ERQ8 282 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 RNF103O00237 685 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 SMAD6O43541 496 aaKnown RBP18.7■□□□□ 0.58
DDX39A-212ENST00000590260 ATP9BO43861 1147 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 ZMPSTE24O75844 475 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 SRCP12931 536 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 METAP1P53582 386 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 ST8SIA6P61647 398 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 ZNF33AQ06730 810 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 RSPO4Q2I0M5 234 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-212ENST00000590260 TDRD12Q587J7 1177 aaKnown RBP18.7■□□□□ 0.58
DDX39A-212ENST00000590260 ACBD5Q5T8D3 534 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-212ENST00000590260 DCUN1D2Q6PH85 259 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 SLC36A4Q6YBV0 504 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 TMC6Q7Z403 805 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 CYP2U1Q7Z449 544 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 SLFN11Q7Z7L1 901 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 STK40Q8N2I9 435 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 ZNF653Q96CK0 615 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 IQCDQ96DY2 449 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 VPS45Q9NRW7 570 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 GPATCH2LQ9NWQ4 482 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 DLL3Q9NYJ7 618 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 VPS51Q9UID3 782 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 VPS28Q9UK41 221 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 PILRBQ9UKJ0 227 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 ACTL7AQ9Y615 435 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 PCDH15Q96QU1 1955 aa18.7■□□□□ 0.58
DDX39A-212ENST00000590260 EDDM13A0A1B0GTR0 161 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 C10orf142B7Z368 130 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 CD160O95971 181 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 ACSL1P33121 698 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 OXCT1P55809 520 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 LMNB2Q03252 620 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 SULT2A1Q06520 285 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 CA9Q16790 459 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 ASTE1Q2TB18 679 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-212ENST00000590260 ARL13BQ3SXY8 428 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 DAB2IPQ5VWQ8 1189 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 LYSMD4Q5XG99 296 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 ZNF776Q68DI1 518 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-212ENST00000590260 PPP1R2P3Q6NXS1 205 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 FAM124AQ86V42 546 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 DRC7Q8IY82 874 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 SH2D3CQ8N5H7 860 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 PIGKQ92643 395 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 ARHGEF26Q96DR7 871 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 HSPA12BQ96MM6 686 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 DNAJC7Q99615 494 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 GPR174Q9BXC1 333 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 MUC3BQ9H195 1237 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 NOL6Q9H6R4 1146 aaKnown RBP18.69■□□□□ 0.58
DDX39A-212ENST00000590260 FBRSQ9HAH7 460 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 TMEM248Q9NWD8 314 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 MYO1AQ9UBC5 1043 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 HS3ST2Q9Y278 367 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 SLCO1B1Q9Y6L6 691 aa18.69■□□□□ 0.58
DDX39A-212ENST00000590260 NUMA1Q14980 2115 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 LNP1A1A4G5 178 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 ILVBLA1L0T0 632 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 ZBTB24O43167 697 aaPredicted RBP18.68■□□□□ 0.58
DDX39A-212ENST00000590260 ZNF821O75541 412 aaPredicted RBP18.68■□□□□ 0.58
DDX39A-212ENST00000590260 TCF4P15884 667 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 RHOQP17081 205 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 MAOBP27338 520 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 OR1E1P30953 314 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 ACVRL1P37023 503 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 ARF5P84085 180 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 SPECC1LQ69YQ0 1117 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 SCYL2Q6P3W7 929 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 LINGO4Q6UY18 593 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 AADATQ8N5Z0 425 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 DCAF4L2Q8NA75 395 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 VOPP1Q96AW1 172 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 THAP2Q9H0W7 228 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 PABPC3Q9H361 631 aaKnown RBP18.68■□□□□ 0.58
DDX39A-212ENST00000590260 FSCN3Q9NQT6 498 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 SARDHQ9UL12 918 aa18.68■□□□□ 0.58
DDX39A-212ENST00000590260 BZW2Q9Y6E2 419 aaKnown RBP18.68■□□□□ 0.58
DDX39A-212ENST00000590260 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms