RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SPRYD7Q5W111 196 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 TMPRSS6Q8IU80 811 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 ARID3BQ8IVW6 561 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-206ENST00000589117 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.58□□□□□ -1.2
ZNF540-206ENST00000589117 DNAAF3Q8N9W5 541 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 SLC7A14Q8TBB6 771 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 SLC2A13Q96QE2 648 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 CPNE1Q99829 537 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 TRIM56Q9BRZ2 755 aaKnown RBP7.58□□□□□ -1.2
ZNF540-206ENST00000589117 PRDM12Q9H4Q4 367 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 KCNK13Q9HB14 408 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 CHST12Q9NRB3 414 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 GEMIN8Q9NWZ8 242 aaKnown RBP7.58□□□□□ -1.2
ZNF540-206ENST00000589117 DDX43Q9NXZ2 648 aaKnown RBP7.58□□□□□ -1.2
ZNF540-206ENST00000589117 COX16Q9P0S2 106 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 ADAM28Q9UKQ2 775 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 NME7Q9Y5B8 376 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 PTCH2Q9Y6C5 1203 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 PLXNB2O15031 1838 aa7.58□□□□□ -1.2
ZNF540-206ENST00000589117 RALGAPA2Q2PPJ7 1873 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 FAM237BA0A1B0GVD1 139 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 C9IYK1 514 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 MEN1O00255 615 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 FCHO1O14526 889 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 GSC2O15499 205 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 MFSD11O43934 449 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 NCAM1P13591 858 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 TYK2P29597 1187 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 RPL9P32969 192 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 GP5P40197 560 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 CLNS1AP54105 237 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 MAP3K7CLP57077 242 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 GJA9P57773 515 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 COG7P83436 770 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 OCRLQ01968 901 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 SCAPQ12770 1279 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 BMPR2Q13873 1038 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 CRYMQ14894 314 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 DNAL1Q4LDG9 190 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 MDH1BQ5I0G3 518 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 WSCD1Q658N2 575 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 TRMT10BQ6PF06 316 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 PACS1Q6VY07 963 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 DSTYKQ6XUX3 929 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 CDHR3Q6ZTQ4 885 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 CLEC20AQ6ZU45 233 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ZNF534Q76KX8 674 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 METTL23Q86XA0 190 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 PYROXD2Q8N2H3 581 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 GPATCH11Q8N954 259 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 UTP4Q969X6 686 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 PTCD3Q96EY7 689 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 PGAP3Q96FM1 320 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 PPP1R2P1Q96PQ5 205 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 LPIN3Q9BQK8 851 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 SYT17Q9BSW7 474 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 CXCL16Q9H2A7 254 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 NSMCE4AQ9NXX6 385 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 PPARGC1AQ9UBK2 798 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 FBXW11Q9UKB1 542 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 CDH9Q9ULB4 789 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 APOBEC2Q9Y235 224 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 RPS6KL1Q9Y6S9 549 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 A8MUI8 341 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 CIB2O75838 187 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 KLHL2O95198 593 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ADH1AP07327 375 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 SERPINA6P08185 405 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ITGA2BP08514 1039 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 MYL4P12829 197 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 VAV1P15498 845 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 MGAT1P26572 445 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 NPY2RP49146 381 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 AQP5P55064 265 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ZNF33AQ06730 810 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 FRG1Q14331 258 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 FASTKD1Q53R41 847 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 UBXN11Q5T124 520 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ZNF618Q5T7W0 954 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 C4orf50Q6ZRC1 276 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ERMP1Q7Z2K6 904 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 LINC00523Q86TU6 105 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 RASSF3Q86WH2 238 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ZNF567Q8N184 647 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 MPP5Q8N3R9 675 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 TEX9Q8N6V9 391 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ENDOVQ8N8Q3 282 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 PIWIL2Q8TC59 973 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 SMARCD1Q96GM5 515 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 SENP8Q96LD8 212 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 TSNARE1Q96NA8 513 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 PPP1R10Q96QC0 940 aaKnown RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 WDCPQ9H6R7 721 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 ZNF395Q9H8N7 513 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-206ENST00000589117 GOLGA2P5Q9HBQ8 144 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 SMYD2Q9NRG4 433 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 KRT82Q9NSB4 513 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 MID2Q9UJV3 735 aa7.57□□□□□ -1.2
ZNF540-206ENST00000589117 UTRNP46939 3433 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SPECC1L-ADORA2AF8WAN1 911 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms