RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MLNP12872 115 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 GABRR2P28476 465 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 CORO1AP31146 461 aaKnown RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 YBEYP58557 167 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 GAD2Q05329 585 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 STAT4Q14765 748 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ANO4Q32M45 955 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 PARP15Q460N3 678 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 CCDC38Q502W7 563 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ALFQ53S48 1182 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 DNAJC21Q5F1R6 531 aaKnown RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 PPM1LQ5SGD2 360 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 FNBP1LQ5T0N5 605 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 AGBL2Q5U5Z8 902 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 PID1Q7Z2X4 250 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ATP11CQ8NB49 1132 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 PYROXD1Q8WU10 500 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 IGSF8Q969P0 613 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ATP6V1G3Q96LB4 118 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 PPP1R2P1Q96PQ5 205 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 TGS1Q96RS0 853 aaKnown RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 CCDC77Q9BR77 488 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 RNF38Q9H0F5 515 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 GBA3Q9H227 469 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 PPCSQ9HAB8 311 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 NDFIP2Q9NV92 336 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 STOML2Q9UJZ1 356 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 MYO18AQ92614 2054 aaKnown RBP12.34□□□□□ -0.43
CCBE1-203ENST00000589116 GOLGA6CA6NDK9 693 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 MATN3O15232 486 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 CNTN5O94779 1100 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 CA3P07451 260 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 GOLGA6DP0CG33 693 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 PSMB4P28070 264 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 PHBP35232 272 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 MAGEA3P43357 314 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 LMAN1P49257 510 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 CBX1P83916 185 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 ZBTB17Q13105 803 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 FASTKD3Q14CZ7 662 aaKnown RBP12.34□□□□□ -0.43
CCBE1-203ENST00000589116 BBS9Q3SYG4 887 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 TTMPQ5BVD1 217 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 C6orf118Q5T5N4 469 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 TTC39BQ5VTQ0 682 aaPredicted RBP12.34□□□□□ -0.43
CCBE1-203ENST00000589116 TFAP2DQ7Z6R9 452 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 LGI2Q8N0V4 545 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 ZSCAN18Q8TBC5 510 aaPredicted RBP12.34□□□□□ -0.43
CCBE1-203ENST00000589116 MICAL1Q8TDZ2 1067 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 ARL8AQ96BM9 186 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 PGM2Q96G03 612 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
CCBE1-203ENST00000589116 TEKT5Q96M29 485 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 IL12RB2Q99665 862 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 NOL6Q9H6R4 1146 aaKnown RBP12.34□□□□□ -0.43
CCBE1-203ENST00000589116 TRPC7Q9HCX4 862 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 ASAH2Q9NR71 780 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 GOLGA6AQ9NYA3 693 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 VPS18Q9P253 973 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 DPP7Q9UHL4 492 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 RSPH14Q9UHP6 348 aa12.34□□□□□ -0.43
CCBE1-203ENST00000589116 CHD5Q8TDI0 1954 aa12.33□□□□□ -0.43
CCBE1-203ENST00000589116 BDP1A6H8Y1 2624 aa12.33□□□□□ -0.43
CCBE1-203ENST00000589116 RASA4BC9J798 803 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 RASGRF2O14827 1237 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 GRM6O15303 877 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 RASA4O43374 803 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 RAMP2O60895 175 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 SPAG6O75602 509 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 ARHGEF15O94989 841 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 HNRNPA1P09651 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCBE1-203ENST00000589116 CCNB1P14635 433 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 HDCP19113 662 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 IGFBP4P22692 258 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 SLC6A4P31645 630 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 PAPOLAP51003 745 aaKnown RBP12.33□□□□□ -0.44
CCBE1-203ENST00000589116 IRAK1P51617 712 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 EPHA5P54756 1037 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 CDH4P55283 916 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 ERVK-21P61565 698 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 SLC7A9P82251 487 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 MSS51Q4VC12 460 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 ADGRF1Q5T601 910 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 UBAP2Q5T6F2 1119 aaKnown RBP12.33□□□□□ -0.44
CCBE1-203ENST00000589116 GAREM2Q75VX8 874 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 CHST9Q7L1S5 443 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 DENND1CQ8IV53 801 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 KLHDC8BQ8IXV7 354 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 LEMD2Q8NC56 503 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 FBXO36Q8NEA4 188 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 MAML1Q92585 1016 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 ZBTB9Q96C00 473 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 CEP41Q9BYV8 373 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 STMN4Q9H169 189 aaPredicted RBP12.33□□□□□ -0.44
CCBE1-203ENST00000589116 LRRC4CQ9HCJ2 640 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 IPO11Q9UI26 975 aaKnown RBP12.33□□□□□ -0.44
CCBE1-203ENST00000589116 TEX264Q9Y6I9 313 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 NCOR1O75376 2440 aa12.33□□□□□ -0.44
CCBE1-203ENST00000589116 HELZP42694 1942 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms