RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TFB1MQ8WVM0 346 aaKnown RBP23.18■■□□□ 1.3
ACTN4-210ENST00000588618 RSAD2Q8WXG1 361 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 NKD2Q969F2 451 aaPredicted RBP23.18■■□□□ 1.3
ACTN4-210ENST00000588618 SLC39A8Q9C0K1 460 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 MAGEH1Q9H213 219 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 KCNK12Q9HB15 430 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 KIAA1522Q9P206 1035 aaPredicted RBP23.18■■□□□ 1.3
ACTN4-210ENST00000588618 ZNF148Q9UQR1 794 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 RASA4BC9J798 803 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 RASA4O43374 803 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 GNA12Q03113 381 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 GALNT2Q10471 571 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 AP1B1Q10567 949 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 IL31Q6EBC2 164 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 DRICH1Q6PGQ1 229 aaPredicted RBP23.17■■□□□ 1.3
ACTN4-210ENST00000588618 CCDC137Q6PK04 289 aaKnown RBP23.17■■□□□ 1.3
ACTN4-210ENST00000588618 ZNF783Q6ZMS7 281 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 LRRC49Q8IUZ0 686 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 CDKL3Q8IVW4 592 aaPredicted RBP23.17■■□□□ 1.3
ACTN4-210ENST00000588618 CSGALNACT1Q8TDX6 532 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 RUNDC3BQ96NL0 473 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 BRD8Q9H0E9 1235 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 AMACRQ9UHK6 382 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 FEZ2Q9UHY8 353 aaPredicted RBP23.17■■□□□ 1.3
ACTN4-210ENST00000588618 HPCAL4Q9UM19 191 aa23.17■■□□□ 1.3
ACTN4-210ENST00000588618 HACD1B0YJ81 288 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 HOXC11O43248 304 aaPredicted RBP23.16■■□□□ 1.3
ACTN4-210ENST00000588618 GARSP41250 739 aaKnown RBP23.16■■□□□ 1.3
ACTN4-210ENST00000588618 FNTAP49354 379 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 NUMBP49757 651 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 LMNB2Q03252 620 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 FSCBQ5H9T9 825 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 RNF219Q5W0B1 726 aaPredicted RBP23.16■■□□□ 1.3
ACTN4-210ENST00000588618 ARHGAP36Q6ZRI8 547 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 MMGT1Q8N4V1 131 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 NAT16Q8N8M0 369 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 FIBINQ8TAL6 211 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 HMCESQ96FZ2 354 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 LGMNQ99538 433 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 HPS4Q9NQG7 708 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 GTSE1Q9NYZ3 720 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 MYO10Q9HD67 2058 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 PAPOLAP51003 745 aaKnown RBP23.16■■□□□ 1.3
ACTN4-210ENST00000588618 GSTA5Q7RTV2 222 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 GRK7Q8WTQ7 553 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 HDAC11Q96DB2 347 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 SPON2Q9BUD6 331 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 VPS28Q9UK41 221 aa23.16■■□□□ 1.3
ACTN4-210ENST00000588618 MIA3Q5JRA6 1907 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 OTOL1A6NHN0 477 aaPredicted RBP23.15■■□□□ 1.3
ACTN4-210ENST00000588618 ZNF189O75820 626 aaPredicted RBP23.15■■□□□ 1.3
ACTN4-210ENST00000588618 VAV1P15498 845 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 PTGIRP43119 386 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 NRLP54845 237 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 ITPRIPL2Q3MIP1 535 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 HEATR6Q6AI08 1181 aaKnown RBP23.15■■□□□ 1.3
ACTN4-210ENST00000588618 ATL2Q8NHH9 583 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 TMEM121Q9BTD3 319 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 SLC2A11Q9BYW1 496 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 SP110Q9HB58 689 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 ATP13A1Q9HD20 1204 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 DNAJC17Q9NVM6 304 aaKnown RBP23.15■■□□□ 1.3
ACTN4-210ENST00000588618 PCYOX1Q9UHG3 505 aa23.15■■□□□ 1.3
ACTN4-210ENST00000588618 A0A0D9SEW6 157 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 SGK1O00141 431 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 CACNG3O60359 315 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 ACVRL1P37023 503 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 GDF10P55107 478 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 SLC12A1Q13621 1099 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 SLC45A4Q5BKX6 768 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 TIGD7Q6NT04 549 aaPredicted RBP23.14■■□□□ 1.3
ACTN4-210ENST00000588618 PRUNE1Q86TP1 453 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 CCDC26Q8TAB7 109 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 TTC8Q8TAM2 541 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 ARHGEF2Q92974 986 aaKnown RBP23.14■■□□□ 1.3
ACTN4-210ENST00000588618 QKIQ96PU8 341 aaKnown RBP eCLIP23.14■■□□□ 1.35e-8■□□□□ 9.4
ACTN4-210ENST00000588618 LRRC1Q9BTT6 524 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 ABCB8Q9NUT2 735 aa23.14■■□□□ 1.3
ACTN4-210ENST00000588618 MYO18AQ92614 2054 aaKnown RBP23.14■■□□□ 1.29
ACTN4-210ENST00000588618 TRIOO75962 3097 aa23.14■■□□□ 1.29
ACTN4-210ENST00000588618 CFAP69A5D8W1 941 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 RAD51CO43502 376 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 ITGAVP06756 1048 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 CSKP41240 450 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 PRKD1Q15139 912 aaPredicted RBP23.13■■□□□ 1.29
ACTN4-210ENST00000588618 CCDC70Q6NSX1 233 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 GLIS1Q8NBF1 620 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 OR7D4Q8NG98 312 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 NSMCE1Q8WV22 266 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 USP29Q9HBJ7 922 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.13■■□□□ 1.292e-6■■■□□ 15.7
ACTN4-210ENST00000588618 IPO11Q9UI26 975 aaKnown RBP23.13■■□□□ 1.29
ACTN4-210ENST00000588618 DRG1Q9Y295 367 aaKnown RBP23.13■■□□□ 1.29
ACTN4-210ENST00000588618 V9GYY5 206 aaPredicted RBP23.13■■□□□ 1.29
ACTN4-210ENST00000588618 TTI1O43156 1089 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 GAS8O95995 478 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 RBL1P28749 1068 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 DGKGP49619 791 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 ZNF33AQ06730 810 aa23.13■■□□□ 1.29
ACTN4-210ENST00000588618 PPIDQ08752 370 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms