RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 ATG16L1Q676U5 607 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SLC9A4Q6AI14 798 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SYCE2Q6PIF2 218 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 TRIM72Q6ZMU5 477 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 MFSD6Q6ZSS7 791 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 PLEKHM3Q6ZWE6 761 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 ZNF438Q7Z4V0 828 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 CAMK1DQ8IU85 385 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 CCDC60Q8IWA6 550 aaPredicted RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 BBS7Q8IWZ6 715 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 FBXW8Q8N3Y1 598 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 RAET1EQ8TD07 263 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 CCDC124Q96CT7 223 aaKnown RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SLC26A6Q9BXS9 759 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 TMEM168Q9H0V1 697 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 NGRNQ9NPE2 291 aaKnown RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 PRDM8Q9NQV8 689 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 POLE4Q9NR33 117 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 GLTPQ9NZD2 209 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SFMBT1Q9UHJ3 866 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 DTX4Q9Y2E6 619 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 RPH3AQ9Y2J0 694 aaPredicted RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 MRPS7Q9Y2R9 242 aaKnown RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 CSNK1G3Q9Y6M4 447 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 FAM237BA0A1B0GVD1 139 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 ISPDA4D126 451 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 EYA2O00167 538 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 PRKAB2O43741 272 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 ZNF623O75123 536 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 POP4O95707 220 aaKnown RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 NPR3P17342 541 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 MMP8P22894 467 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 EEF1DP29692 281 aaKnown RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 UQCRC1P31930 480 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 CYP2C18P33260 490 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 COILP38432 576 aaPredicted RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SOX9P48436 509 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 UBE3AQ05086 875 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 MGAT3Q09327 533 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 ASIC2Q16515 512 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 ZBTB41Q5SVQ8 909 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 AGAP6Q5VW22 663 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 FAM180BQ6P0A1 224 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 NT5DC4Q86YG4 428 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SYTL1Q8IYJ3 562 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SNX31Q8N9S9 440 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 ZNF680Q8NEM1 530 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 GOT1L1Q8NHS2 421 aaPredicted RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SYTL5Q8TDW5 730 aaPredicted RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 GTF2H4Q92759 462 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 LPPQ93052 612 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 TESCQ96BS2 214 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 RIPOR3Q96MK2 946 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 AGAP4Q96P64 663 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 SERPINI1Q99574 410 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 KIFC1Q9BW19 673 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 KATNAL1Q9BW62 490 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 ANKRD60Q9BZ19 345 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 LHX5Q9H2C1 402 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 ZHX3Q9H4I2 956 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 KBTBD4Q9NVX7 518 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 PIH1D1Q9NWS0 290 aaKnown RBP6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 NAGPAQ9UK23 515 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 PCDHB13Q9Y5F0 798 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 GMPPBQ9Y5P6 360 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 NDUFB9Q9Y6M9 179 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 CLUHO75153 1309 aa6.6□□□□□ -1.35
AP000547.3-204ENST00000588548 PRSS51A0A1B0GVH4 220 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 HMX3A6NHT5 357 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 A8MUA0 341 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 PLOD2O00469 737 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 NDUFS6O75380 124 aaKnown RBP6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 DAB1O75553 588 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 SNAPINO95295 136 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 ZBTB7AO95365 584 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 GGPS1O95749 300 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 GSNP06396 782 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 CBLP22681 906 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 ACAT1P24752 427 aaKnown RBP6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 EPHA3P29320 983 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 GJC1P36383 396 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 GRIA1P42261 906 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 MCAMP43121 646 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 AP1S2P56377 157 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 IL1RL1Q01638 556 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 BST2Q10589 180 aaKnown RBP6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 BFSP1Q12934 665 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 ZNF211Q13398 564 aaPredicted RBP6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 TAF1CQ15572 869 aaPredicted RBP6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 SGCAQ16586 387 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 TMEM65Q6PI78 240 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 GADL1Q6ZQY3 521 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 CEP68Q76N32 757 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 CHSY1Q86X52 802 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 ZDHHC14Q8IZN3 488 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 TMEM102Q8N9M5 508 aaPredicted RBP6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 KCNH5Q8NCM2 988 aa6.59□□□□□ -1.35
AP000547.3-204ENST00000588548 TMEM35BQ8NCS4 154 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms