RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 TCAF2A6NFQ2 919 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 TLR4O00206 839 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 YKT6O15498 198 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 RTN2O75298 545 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 JUPP14923 745 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 ZNF18P17022 549 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 CCR1P32246 355 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 DRD3P35462 400 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 HNF1BP35680 557 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 GGCXP38435 758 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 NXPH1P58417 271 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 BECN1Q14457 450 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 MEA1Q16626 185 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 SOWAHCQ53LP3 525 aaPredicted RBP17.31■□□□□ 0.36
LINC01842-201ENST00000588275 TTC39BQ5VTQ0 682 aaPredicted RBP17.31■□□□□ 0.36
LINC01842-201ENST00000588275 NAPEPLDQ6IQ20 393 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 PRPF39Q86UA1 669 aaKnown RBP17.31■□□□□ 0.36
LINC01842-201ENST00000588275 TMPRSS12Q86WS5 348 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 SCUBE2Q9NQ36 999 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 VANGL2Q9ULK5 521 aa17.31■□□□□ 0.36
LINC01842-201ENST00000588275 SLC2A3P11169 496 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 MARSP56192 900 aaKnown RBP17.3■□□□□ 0.36
LINC01842-201ENST00000588275 BNIP3Q12983 259 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 NME3Q13232 169 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 CXorf57Q6NSI4 855 aaKnown RBP17.3■□□□□ 0.36
LINC01842-201ENST00000588275 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 FOXR2Q6PJQ5 311 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 ENOSF1Q7L5Y1 443 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 DSG4Q86SJ6 1040 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 ELOA2Q8IYF1 753 aaPredicted RBP17.3■□□□□ 0.36
LINC01842-201ENST00000588275 PRMT1Q99873 361 aaKnown RBP17.3■□□□□ 0.36
LINC01842-201ENST00000588275 VPS28Q9UK41 221 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 PCDHGA1Q9Y5H4 931 aa17.3■□□□□ 0.36
LINC01842-201ENST00000588275 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.29■□□□□ 0.36
LINC01842-201ENST00000588275 C1QTNF3-AMACRE9PGA6 284 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 FGFR1OPO95684 399 aaKnown RBP17.29■□□□□ 0.36
LINC01842-201ENST00000588275 IRAK1P51617 712 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 OXCT1P55809 520 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 APBA1Q02410 837 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 ZNF177Q13360 481 aaPredicted RBP17.29■□□□□ 0.36
LINC01842-201ENST00000588275 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 FAM46CQ5VWP2 391 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 OR6B2Q6IFH4 312 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 TRIM65Q6PJ69 517 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 FAM183BPQ6ZVS7 135 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 Q6ZVU0 165 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 OXR1Q8N573 874 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 FRS2Q8WU20 508 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 NXPE2Q96DL1 559 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 CRELD1Q96HD1 420 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 PPP1R13BQ96KQ4 1090 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 SLC2A13Q96QE2 648 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 CPXM1Q96SM3 734 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 SARDHQ9UL12 918 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 TPX2Q9ULW0 747 aaKnown RBP17.29■□□□□ 0.36
LINC01842-201ENST00000588275 IGSF10Q6WRI0 2623 aa17.29■□□□□ 0.36
LINC01842-201ENST00000588275 LOC400499M0QZD8 3231 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 EIF4E1BA6NMX2 242 aaKnown RBP17.28■□□□□ 0.36
LINC01842-201ENST00000588275 BECN2A8MW95 431 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 LATO43561 262 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 PLRG1O43660 514 aaKnown RBP17.28■□□□□ 0.36
LINC01842-201ENST00000588275 HSF2BPO75031 334 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 SDC3O75056 442 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 SLC9A1P19634 815 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 ACADVLP49748 655 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 CNTN1Q12860 1018 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 AUHQ13825 339 aaKnown RBP17.28■□□□□ 0.36
LINC01842-201ENST00000588275 STAT4Q14765 748 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 DLG2Q15700 870 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 EFHC1Q5JVL4 640 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 HES3Q5TGS1 186 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 SPATS2Q86XZ4 545 aaKnown RBP17.28■□□□□ 0.36
LINC01842-201ENST00000588275 MFSD2AQ8NA29 543 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 C1orf131Q8NDD1 294 aaKnown RBP17.28■□□□□ 0.36
LINC01842-201ENST00000588275 OR52K2Q8NGK3 314 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 PIP4K2CQ8TBX8 421 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 NOX5Q96PH1 765 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 MYOCQ99972 504 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 SIK2Q9H0K1 926 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 MUC3BQ9H195 1237 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 SYNCQ9H7C4 482 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 CA5BQ9Y2D0 317 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 HS3ST4Q9Y661 456 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 AK5Q9Y6K8 562 aa17.28■□□□□ 0.36
LINC01842-201ENST00000588275 DOCK9Q9BZ29 2069 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 E9PAM4 449 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 SLC7A4O43246 635 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 GADD45BO75293 160 aaPredicted RBP17.27■□□□□ 0.36
LINC01842-201ENST00000588275 GLI1P08151 1106 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 ABCG1P45844 678 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 PLK1P53350 603 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 SEMG2Q02383 582 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 EIF4EBP2Q13542 120 aaPredicted RBP17.27■□□□□ 0.36
LINC01842-201ENST00000588275 AGBL4Q5VU57 503 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 GBP6Q6ZN66 633 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 C11orf57Q6ZUT1 292 aaPredicted RBP17.27■□□□□ 0.36
LINC01842-201ENST00000588275 WDTC1Q8N5D0 677 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 FAM81BQ96LP2 452 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 FEM1AQ9BSK4 669 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms