RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 RAPGEF4Q8WZA2 1011 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 UTP4Q969X6 686 aaKnown RBP5.78□□□□□ -1.48
LINC01538-201ENST00000588074 ZNF837Q96EG3 531 aaPredicted RBP5.78□□□□□ -1.48
LINC01538-201ENST00000588074 ART5Q96L15 291 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 C17orf80Q9BSJ5 609 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 WACQ9BTA9 647 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 CNPPD1Q9BV87 410 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 NUSAP1Q9BXS6 441 aaKnown RBP5.78□□□□□ -1.48
LINC01538-201ENST00000588074 POFUT1Q9H488 388 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 ZNF287Q9HBT7 754 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 ZDHHC7Q9NXF8 308 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 NCKIPSDQ9NZQ3 722 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 SENP1Q9P0U3 644 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 STX18Q9P2W9 335 aaKnown RBP5.78□□□□□ -1.48
LINC01538-201ENST00000588074 CPNE7Q9UBL6 633 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 GMEB2Q9UKD1 530 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 ANGPTL2Q9UKU9 493 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 STARD13Q9Y3M8 1113 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 CNTNAP4Q9C0A0 1308 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 ADGRL1O94910 1474 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 KDM6BO15054 1643 aa5.78□□□□□ -1.48
LINC01538-201ENST00000588074 CHD2O14647 1828 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ARHGEF35A5YM69 484 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 PGPEP1LA6NFU8 196 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 RAD51BO15315 384 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 HOXC11O43248 304 aaPredicted RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 PI15O43692 258 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ZBTB14O43829 449 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 DTNBO60941 627 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SLC4A1P02730 911 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 RPS17P08708 135 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 HADHAP40939 763 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 LIMK1P53667 647 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ATXN1P54253 815 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 STX1BP61266 288 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 PRAMEP78395 509 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 XIAPP98170 497 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 PRKCQQ04759 706 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 DAG1Q14118 895 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 GIT2Q14161 759 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 MBTPS1Q14703 1052 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SSPNQ14714 243 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 MTF1Q14872 753 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 C16orf72Q14CZ0 275 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 UGT8Q16880 541 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ZNF829Q3KNS6 432 aaPredicted RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 COLGALT2Q8IYK4 626 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 OR8H1Q8NGG4 311 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SH3RF2Q8TEC5 729 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 TNFRSF25Q93038 417 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 NCLNQ969V3 563 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 VPS33AQ96AX1 596 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ASB2Q96Q27 587 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SELENOSQ9BQE4 189 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ACAT2Q9BWD1 397 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 FOXQ1Q9C009 403 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 S100A14Q9HCY8 104 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 GDF3Q9NR23 364 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 RAD18Q9NS91 495 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ASNSD1Q9NWL6 643 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 EHD3Q9NZN3 535 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 DNAJB4Q9UDY4 337 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 TBC1D29Q9UFV1 150 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 AMACRQ9UHK6 382 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 PALD1Q9ULE6 856 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 VPS4AQ9UN37 437 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ARL2BPQ9Y2Y0 163 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 RBMX2Q9Y388 322 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SF3B6Q9Y3B4 125 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 KDM3AQ9Y4C1 1321 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 A0A1W2PP64 1363 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 CDK12Q9NYV4 1490 aaPredicted RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 GPATCH8Q9UKJ3 1502 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 TSPOAP1O95153 1857 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SYNJ2BP-COX16A0A087WUM0 186 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SHISA3A0PJX4 238 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 K7EPI3 171 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 TRAFD1O14545 582 aaPredicted RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ACOX3O15254 700 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 DNAJB5O75953 348 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ASS1P00966 412 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SYN1P17600 705 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 GM2AP17900 193 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ACAT1P24752 427 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 EEF1GP26641 437 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 LRPAP1P30533 357 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 SERPINF1P36955 418 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 STAT1P42224 750 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 ARL4DP49703 201 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 DRG2P55039 364 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 RNF4P78317 190 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 IFITM2Q01629 132 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 FMO1Q01740 532 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 COASYQ13057 564 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 IDI1Q13907 227 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 TRIM25Q14258 630 aaKnown RBP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 EFTUD2Q15029 972 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC01538-201ENST00000588074 DPCR1Q3MIW9 517 aa5.77□□□□□ -1.49
LINC01538-201ENST00000588074 CFAP221Q4G0U5 840 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms