RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 RASA4BC9J798 803 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 RASA4O43374 803 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 PI15O43692 258 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 MFSD11O43934 449 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 SNAP91O60641 907 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 RAMP2O60895 175 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 MAP3K6O95382 1288 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 TNFRSF4P43489 277 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 KIR2DL1P43626 348 aaPredicted RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 SLC10A2Q12908 348 aaPredicted RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 SLC12A1Q13621 1099 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 POLD3Q15054 466 aaPredicted RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 PAFAH1B3Q15102 231 aaKnown RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 RPS6KA1Q15418 735 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 PREPLQ4J6C6 727 aaPredicted RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 TFDP3Q5H9I0 405 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 AFMIDQ63HM1 303 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 EGFLAMQ63HQ2 1017 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 KAZNQ674X7 775 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 SLC9A4Q6AI14 798 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 TMCO3Q6UWJ1 677 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 NPNTQ6UXI9 565 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 ARHGAP36Q6ZRI8 547 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 RFX6Q8HWS3 928 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 CCDC105Q8IYK2 499 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 AHI1Q8N157 1196 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 PLD5Q8N7P1 536 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 PJA1Q8NG27 643 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 WFIKKN2Q8TEU8 576 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 EXOC4Q96A65 974 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 TTC17Q96AE7 1141 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 HMCESQ96FZ2 354 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 RBM41Q96IZ5 413 aaKnown RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 WDR24Q96S15 920 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 NELL2Q99435 816 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 SPON2Q9BUD6 331 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 HEMGNQ9BXL5 484 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 MAK16Q9BXY0 300 aaKnown RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 ACE2Q9BYF1 805 aaPredicted RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 CIPCQ9C0C6 399 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 MAGEH1Q9H213 219 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 ELOVL2Q9NXB9 296 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 VPS28Q9UK41 221 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 MRPS17Q9Y2R5 130 aaKnown RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 STARD13Q9Y3M8 1113 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 ACTL7AQ9Y615 435 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 NYNRINQ9P2P1 1898 aaKnown RBP10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 NCOR1O75376 2440 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 MUC3AQ02505 3323 aa10.97□□□□□ -0.65
SMARCA4-213ENST00000587988 MYO18AQ92614 2054 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 KCNK3O14649 394 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 FANCGO15287 622 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 CST8O60676 142 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 RNF40O75150 1001 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 ZMPSTE24O75844 475 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 ATP1A1P05023 1023 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 DCNP07585 359 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 POLR2EP19388 210 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 TIE1P35590 1138 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 STK19P49842 368 aaPredicted RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 PAPOLAP51003 745 aaKnown RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 NDST2P52849 883 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 OXCT1P55809 520 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 YBEYP58557 167 aaPredicted RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 COPS2P61201 443 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 GNG11P61952 73 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 DYNLT1P63172 113 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 GBE1Q04446 702 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 GAS6Q14393 721 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 DMC1Q14565 340 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 PPP2R5EQ16537 467 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 PTPRNQ16849 979 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 C2orf27AQ580R0 203 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 IL31Q6EBC2 164 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 PKN3Q6P5Z2 889 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF783Q6ZMS7 281 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 Q6ZS52 159 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 LZTR1Q8N653 840 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 USP33Q8TEY7 942 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 LRRN4Q8WUT4 740 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 UBE2Q2Q8WVN8 375 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 MYO19Q96H55 970 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 MRGPRX3Q96LB0 322 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 ACOX2Q99424 681 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 OSBPL8Q9BZF1 889 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 MFSD1Q9H3U5 465 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 ATP13A1Q9HD20 1204 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 POLR3BQ9NW08 1133 aaPredicted RBP10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 VPS51Q9UID3 782 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 SIT1Q9Y3P8 196 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 JRKLQ9Y4A0 524 aa10.96□□□□□ -0.65
SMARCA4-213ENST00000587988 FAM86C2PA6NEL3 165 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 WASH3PC4AMC7 463 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 J3KR12 359 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 CBX4O00257 560 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 DFFAO00273 331 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 APOL1O14791 398 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 TIMM44O43615 452 aa10.95□□□□□ -0.66
SMARCA4-213ENST00000587988 CD160O95971 181 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms