RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 KNL1Q8NG31 2342 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 TP53BP1Q12888 1972 aaPredicted RBP14.57□□□□□ -0.08
ERCC1-205ENST00000587888 A0A1B0GVM2 712 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 TCAF2A6NFQ2 919 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 BECN2A8MW95 431 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 GADD45BO75293 160 aaPredicted RBP14.57□□□□□ -0.08
ERCC1-205ENST00000587888 FGFR1OPO95684 399 aaKnown RBP14.57□□□□□ -0.08
ERCC1-205ENST00000587888 NXPH1P58417 271 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 AUHQ13825 339 aaKnown RBP14.57□□□□□ -0.08
ERCC1-205ENST00000587888 DLG2Q15700 870 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 MEA1Q16626 185 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 OR6B2Q6IFH4 312 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 CXorf57Q6NSI4 855 aaKnown RBP14.57□□□□□ -0.08
ERCC1-205ENST00000587888 TRIM65Q6PJ69 517 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 ENOSF1Q7L5Y1 443 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 OR52K2Q8NGK3 314 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 OR8D1Q8WZ84 308 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 DCBLD2Q96PD2 775 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 SPAG5Q96R06 1193 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 PPP1R9BQ96SB3 815 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 FEM1AQ9BSK4 669 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 SIK2Q9H0K1 926 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 ARHGAP20Q9P2F6 1191 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 SLC25A13Q9UJS0 675 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 VANGL2Q9ULK5 521 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 CACNA1GO43497 2377 aa14.57□□□□□ -0.08
ERCC1-205ENST00000587888 CABIN1Q9Y6J0 2220 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 YKT6O15498 198 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 RFPL3O75679 317 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 HNF1BP35680 557 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 GGCXP38435 758 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 IRAK1P51617 712 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 OXCT1P55809 520 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 CNTN1Q12860 1018 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 STAT4Q14765 748 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 TTC39BQ5VTQ0 682 aaPredicted RBP14.56□□□□□ -0.08
ERCC1-205ENST00000587888 FAM46CQ5VWP2 391 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 NAPEPLDQ6IQ20 393 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 FAM183BPQ6ZVS7 135 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 DSG4Q86SJ6 1040 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 C14orf80Q86SX3 495 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 SPATS2Q86XZ4 545 aaKnown RBP14.56□□□□□ -0.08
ERCC1-205ENST00000587888 MFSD2AQ8NA29 543 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 ALG14Q96F25 216 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 SLC2A13Q96QE2 648 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 SCUBE2Q9NQ36 999 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 VPS28Q9UK41 221 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 PPM1HQ9ULR3 514 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 PCDHGA1Q9Y5H4 931 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 HS3ST4Q9Y661 456 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 AK5Q9Y6K8 562 aa14.56□□□□□ -0.08
ERCC1-205ENST00000587888 WDFY3Q8IZQ1 3526 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 C10orf142B7Z368 130 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 LATO43561 262 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 PLRG1O43660 514 aaKnown RBP14.55□□□□□ -0.08
ERCC1-205ENST00000587888 ATP9BO43861 1147 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 HSF2BPO75031 334 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 ERBB2P04626 1255 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 GLI1P08151 1106 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 C1SP09871 688 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 EPHA8P29322 1005 aaPredicted RBP14.55□□□□□ -0.08
ERCC1-205ENST00000587888 RNASE9P60153 205 aaKnown RBP14.55□□□□□ -0.08
ERCC1-205ENST00000587888 TARDBPQ13148 414 aaKnown RBP eCLIP14.55□□□□□ -0.08
ERCC1-205ENST00000587888 C6orf118Q5T5N4 469 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 GBP6Q6ZN66 633 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 C11orf57Q6ZUT1 292 aaPredicted RBP14.55□□□□□ -0.08
ERCC1-205ENST00000587888 Q6ZVU0 165 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 C1orf131Q8NDD1 294 aaKnown RBP14.55□□□□□ -0.08
ERCC1-205ENST00000587888 PIP4K2CQ8TBX8 421 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 KLK6Q92876 244 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 CRELD1Q96HD1 420 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 FAM81BQ96LP2 452 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 MUC3BQ9H195 1237 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 KDM4CQ9H3R0 1056 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 ERVMER34-1Q9H9K5 563 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 TPX2Q9ULW0 747 aaKnown RBP14.55□□□□□ -0.08
ERCC1-205ENST00000587888 CA5BQ9Y2D0 317 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 PKD1L2Q7Z442 2459 aa14.55□□□□□ -0.08
ERCC1-205ENST00000587888 FAM170AA1A519 330 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 C1QTNF3-AMACRE9PGA6 284 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 M0QYT0 321 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 MCF2LO15068 1137 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 SLC31A1O15431 190 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 SLC7A4O43246 635 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 SDC3O75056 442 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 PAGE1O75459 146 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 KRT9P35527 623 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 RXRGP48443 463 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 ACADVLP49748 655 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 SLC6A3Q01959 620 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 SEMG2Q02383 582 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 PTK2Q05397 1052 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 TSC1Q92574 1164 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 NOX5Q96PH1 765 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 MYOCQ99972 504 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 SYNCQ9H7C4 482 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 PLCB1Q9NQ66 1216 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 ASNSD1Q9NWL6 643 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 APEX2Q9UBZ4 518 aa14.54□□□□□ -0.08
ERCC1-205ENST00000587888 PCDHGC3Q9UN70 934 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms