RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ANKMY2Q8IV38 441 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 RTL3Q8N8U3 475 aaKnown RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 MCUQ8NE86 351 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 SMG7Q92540 1137 aaKnown RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 TLCD1Q96CP7 247 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 FERMT1Q9BQL6 677 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 FRMD8Q9BZ67 464 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 SFXN1Q9H9B4 322 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 NDFIP2Q9NV92 336 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 TRPM5Q9NZQ8 1165 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 SEPT10Q9P0V9 454 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 UXTQ9UBK9 157 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 A0A1W2PRU2 124 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 C2orf78A6NCI8 922 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 RASGRF2O14827 1237 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 TBX10O75333 385 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 FDFT1P37268 417 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 GPX6P59796 221 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 CYP4F8P98187 520 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 MTM1Q13496 603 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 AUHQ13825 339 aaKnown RBP20.94■□□□□ 0.94
ATG4D-204ENST00000586417 TERF2Q15554 542 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 SLC5A9Q2M3M2 681 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 CTC1Q2NKJ3 1217 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 BBS9Q3SYG4 887 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 C6orf118Q5T5N4 469 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 AFMIDQ63HM1 303 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 EP400NLQ6ZTU2 488 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 ZNF534Q76KX8 674 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 CAND1Q86VP6 1230 aaKnown RBP20.94■□□□□ 0.94
ATG4D-204ENST00000586417 NLRP14Q86W24 1093 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 AGGF1Q8N302 714 aaeCLIP20.94■□□□□ 0.94
ATG4D-204ENST00000586417 LZTR1Q8N653 840 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 ZSCAN18Q8TBC5 510 aaPredicted RBP20.94■□□□□ 0.94
ATG4D-204ENST00000586417 PRMT1Q99873 361 aaKnown RBP20.94■□□□□ 0.94
ATG4D-204ENST00000586417 DZANK1Q9NVP4 752 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 CLDND1Q9NY35 253 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 MPP6Q9NZW5 540 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 VANGL2Q9ULK5 521 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 HBS1LQ9Y450 684 aaKnown RBP20.94■□□□□ 0.94
ATG4D-204ENST00000586417 UNC80Q8N2C7 3258 aa20.94■□□□□ 0.94
ATG4D-204ENST00000586417 DOCK4Q8N1I0 1966 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 IGLV3-10A0A075B6K4 115 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 TLDC2A0PJX2 215 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 PAPLNO95428 1278 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 HMBSP08397 361 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 LTBRP36941 435 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 SLCO1A2P46721 670 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 IRAK1P51617 712 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 KPNA1P52294 538 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-204ENST00000586417 EPHA5P54756 1037 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 LONRF1Q17RB8 773 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 TNFAIP8L3Q5GJ75 292 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 STXBP5Q5T5C0 1151 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 EMC10Q5UCC4 262 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 KLHDC10Q6PID8 442 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 DEFB123Q8N688 67 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 GUCD1Q96NT3 240 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 PIDD1Q9HB75 910 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 BCCIPQ9P287 314 aaKnown RBP eCLIP20.93■□□□□ 0.94
ATG4D-204ENST00000586417 IGSF9Q9P2J2 1179 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 PPARGC1AQ9UBK2 798 aaKnown RBP20.93■□□□□ 0.94
ATG4D-204ENST00000586417 SLC12A6Q9UHW9 1150 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 DNMT3LQ9UJW3 386 aa20.93■□□□□ 0.94
ATG4D-204ENST00000586417 NOVA2Q9UNW9 492 aaKnown RBP20.93■□□□□ 0.94
ATG4D-204ENST00000586417 A0A087WUV0 522 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-204ENST00000586417 SMIM23A6NLE4 172 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 MTSS1O43312 755 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 MOSPD3O75425 235 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 ATP5C1P36542 298 aaKnown RBP20.92■□□□□ 0.94
ATG4D-204ENST00000586417 MAGEA3P43357 314 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 ZNF33AQ06730 810 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 PARP6Q2NL67 630 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 HECTD3Q5T447 861 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 TXNDC8Q6A555 127 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 TADA2BQ86TJ2 420 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 IGDCC3Q8IVU1 814 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 FBXO36Q8NEA4 188 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 PYROXD1Q8WU10 500 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 TSGA13Q96PP4 275 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 RNF38Q9H0F5 515 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 ATXN3LQ9H3M9 355 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 TEX264Q9Y6I9 313 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 MYO18AQ92614 2054 aaKnown RBP20.92■□□□□ 0.94
ATG4D-204ENST00000586417 COCHO43405 550 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 AVILO75366 819 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 POU2F2P09086 479 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 PSMB4P28070 264 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 KCNQ1P51787 676 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 ZBTB17Q13105 803 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 STAT4Q14765 748 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 CCDC85BQ15834 202 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-204ENST00000586417 PABPC1LQ4VXU2 614 aaKnown RBP20.92■□□□□ 0.94
ATG4D-204ENST00000586417 GPR153Q6NV75 609 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 ARHGAP36Q6ZRI8 547 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 SHKBP1Q8TBC3 707 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 SLC22A12Q96S37 553 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 CYP2S1Q96SQ9 504 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 SLC39A8Q9C0K1 460 aa20.92■□□□□ 0.94
ATG4D-204ENST00000586417 NOL6Q9H6R4 1146 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms