RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SMARCB1Q12824 385 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 MORC3Q14149 939 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 LRRC32Q14392 662 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 TMEM132BQ14DG7 1078 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 SPA17Q15506 151 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 NPTX1Q15818 432 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 UAP1Q16222 522 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 CNGA2Q16280 664 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 GPR162Q16538 588 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 USP41Q3LFD5 358 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ANKRD20A4Q4UJ75 823 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 KANK2Q63ZY3 851 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 IZUMO2Q6UXV1 221 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 TTLL10Q6ZVT0 673 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 APTXQ7Z2E3 356 aaKnown RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 CCDC28AQ8IWP9 274 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ADGRG2Q8IZP9 1017 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 MDM1Q8TC05 714 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 UBLCP1Q8WVY7 318 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 CIDECQ96AQ7 238 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 MBD6Q96DN6 1003 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 AJUBAQ96IF1 538 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 LCORQ96JN0 433 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 C7orf26Q96N11 449 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 RPRD1AQ96P16 312 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ACAP3Q96P50 834 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 RBM14Q96PK6 669 aaKnown RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 YME1L1Q96TA2 773 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 PRMT1Q99873 361 aaKnown RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 KLC2Q9H0B6 622 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 TMEM168Q9H0V1 697 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 OR10A5Q9H207 317 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF696Q9H7X3 374 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 SP140LQ9H930 580 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 USP40Q9NVE5 1235 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 OXSMQ9NWU1 459 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 NDE1Q9NXR1 346 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 EHD2Q9NZN4 543 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 IGSF9Q9P2J2 1179 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ATP6V1HQ9UI12 483 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ADAM29Q9UKF5 820 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ATP10BO94823 1461 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 WDR19Q8NEZ3 1342 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 ARHGEF35A5YM69 484 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 MROH6A6NGR9 719 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 EVPLLA8MZ36 301 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 H0Y858 1186 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 CASQ2O14958 399 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 PEX1O43933 1283 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 ACSL4O60488 711 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 RNASEH1O60930 286 aaKnown RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 PHF2O75151 1096 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 TBX10O75333 385 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 ENTPD5O75356 428 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 CSDE1O75534 798 aaKnown RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 SULT1C4O75897 302 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 TNFAIP8O95379 198 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 PLEKHA8P1O95397 391 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 DDX58O95786 925 aaKnown RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 TFAP2AP05549 437 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 SMIM18P0DKX4 95 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 RARGP13631 454 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 BPIP17213 487 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 BMP7P18075 431 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 ITGAXP20702 1163 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 RRM1P23921 792 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 SLC5A2P31639 672 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 MC4RP32245 332 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 SOX5P35711 763 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 CLK3P49761 638 aaKnown RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 RGS7P49802 495 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 MTHFSP49914 203 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 CCT4P50991 539 aaKnown RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 VCPP55072 806 aaKnown RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 SSTP61278 116 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 CYP4F2P78329 520 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 IL13RA1P78552 427 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 CREB5Q02930 508 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 LRRC63Q05C16 580 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 KLHL30Q0D2K2 578 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 RALGDSQ12967 914 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 TOB2Q14106 344 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 UBE4AQ14139 1066 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 SF3B4Q15427 424 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■■■ 39.8
SMAD4-203ENST00000585448 MEA1Q16626 185 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 ADCK5Q3MIX3 580 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 TIGD2Q4W5G0 525 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 CLVS2Q5SYC1 327 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 METTL11BQ5VVY1 283 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 IQSEC1Q6DN90 963 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 TRMT10BQ6PF06 316 aaKnown RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 DCLRE1AQ6PJP8 1040 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 MIGA2Q7L4E1 593 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 KCTD20Q7Z5Y7 419 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 MRPL10Q7Z7H8 261 aaKnown RBP6.27□□□□□ -1.41
SMAD4-203ENST00000585448 FAM124AQ86V42 546 aa6.27□□□□□ -1.41
SMAD4-203ENST00000585448 ZNF410Q86VK4 478 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms