RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 CTSOP43234 321 aaPredicted RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 CDH4P55283 916 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 OXCT1P55809 520 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 GNG11P61952 73 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 RPL7AP62424 266 aaKnown RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 ATP11AP98196 1134 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 LMNB2Q03252 620 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 ASIC2Q16515 512 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 HNRNPA1L2Q32P51 320 aaKnown RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 FNDC3BQ53EP0 1204 aaKnown RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 ALFQ53S48 1182 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 SH3PXD2AQ5TCZ1 1133 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 SFMBT2Q5VUG0 894 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 PLEKHA7Q6IQ23 1121 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 ACAD10Q6JQN1 1059 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 WDR59Q6PJI9 974 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 RAD9BQ6WBX8 426 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 SLC36A4Q6YBV0 504 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 ZNF662Q6ZS27 426 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 FAM131BQ86XD5 332 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 TMPRSS6Q8IU80 811 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 CCDC117Q8IWD4 279 aaPredicted RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 PGBD3Q8N328 593 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 ZNF366Q8N895 744 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 SYN2Q92777 582 aaPredicted RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 FEM1AQ9BSK4 669 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 TSGA10Q9BZW7 698 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 RSPH9Q9H1X1 276 aaPredicted RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 LUC7LQ9NQ29 371 aaKnown RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 PRSS16Q9NQE7 514 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 ITM2CQ9NQX7 267 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 PPARGC1AQ9UBK2 798 aaKnown RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 PLA2G4CQ9UP65 541 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 ERVW-1Q9UQF0 538 aa8.88□□□□□ -0.99
ATG4D-202ENST00000585437 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 EPN1Q9Y6I3 576 aaPredicted RBP8.88□□□□□ -0.99
ATG4D-202ENST00000585437 DOCK9Q9BZ29 2069 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 PRR5-ARHGAP8B1AHC4 643 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 E9PAM4 449 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 DDX3XO00571 662 aaKnown RBP eCLIP8.87□□□□□ -0.99
ATG4D-202ENST00000585437 KRT86O43790 486 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SYNCRIPO60506 623 aaKnown RBP8.87□□□□□ -0.99
ATG4D-202ENST00000585437 MOCS3O95396 460 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 ADRA1BP35368 520 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 DPP6P42658 865 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 TPMTP51580 245 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 ZNF143P52747 638 aaPredicted RBP8.87□□□□□ -0.99
ATG4D-202ENST00000585437 LIMK1P53667 647 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 AIF1P55008 147 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 ARHGAP8P85298 464 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 ECT2LQ008S8 904 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 OGDHQ02218 1023 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 ZBTB16Q05516 673 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SULT2A1Q06520 285 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 ZNF252P-AS1Q0IIN9 211 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SEMA3BQ13214 749 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SPA17Q15506 151 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 CDO1Q16878 200 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 DNAJC24Q6P3W2 148 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 LPCAT2Q7L5N7 544 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 PHLDB2Q86SQ0 1253 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SETD3Q86TU7 594 aaPredicted RBP8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SLC41A1Q8IVJ1 513 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 CCDC185Q8N715 623 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 FRS2Q8WU20 508 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 FAM172AQ8WUF8 416 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 PRCCQ92733 491 aaPredicted RBP8.87□□□□□ -0.99
ATG4D-202ENST00000585437 RMDN1Q96DB5 314 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SIPA1Q96FS4 1042 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 MCEEQ96PE7 176 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 PSMB7Q99436 277 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 DESI2Q9BSY9 194 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SELENOOQ9BVL4 669 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SIK2Q9H0K1 926 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 ISCUQ9H1K1 167 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 OSBPL2Q9H1P3 480 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 RETREG1Q9H6L5 497 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 VPS45Q9NRW7 570 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SEPT11Q9NVA2 429 aaKnown RBP8.87□□□□□ -0.99
ATG4D-202ENST00000585437 WSB2Q9NYS7 404 aaPredicted RBP8.87□□□□□ -0.99
ATG4D-202ENST00000585437 EVLQ9UI08 416 aaPredicted RBP8.87□□□□□ -0.99
ATG4D-202ENST00000585437 PILRBQ9UKJ0 227 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 USP18Q9UMW8 372 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 NENFQ9UMX5 172 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 CYP8B1Q9UNU6 501 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 HS3ST2Q9Y278 367 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 SNX10Q9Y5X0 201 aa8.87□□□□□ -0.99
ATG4D-202ENST00000585437 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.86□□□□□ -0.99
ATG4D-202ENST00000585437 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.86□□□□□ -0.99
ATG4D-202ENST00000585437 EDDM13A0A1B0GTR0 161 aa8.86□□□□□ -0.99
ATG4D-202ENST00000585437 CXorf51AA0A1B0GTR3 108 aa8.86□□□□□ -0.99
ATG4D-202ENST00000585437 LNP1A1A4G5 178 aa8.86□□□□□ -0.99
ATG4D-202ENST00000585437 TARSL2A2RTX5 802 aaKnown RBP8.86□□□□□ -0.99
ATG4D-202ENST00000585437 EIF3CLB5ME19 914 aaKnown RBP8.86□□□□□ -0.99
ATG4D-202ENST00000585437 FAM72CH0Y354 149 aa8.86□□□□□ -0.99
ATG4D-202ENST00000585437 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
ATG4D-202ENST00000585437 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
ATG4D-202ENST00000585437 ATP9BO43861 1147 aa8.86□□□□□ -0.99
ATG4D-202ENST00000585437 SIN3BO75182 1162 aa8.86□□□□□ -0.99
ATG4D-202ENST00000585437 RTN2O75298 545 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms