RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 CHRNB1P11230 501 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 TCF4P15884 667 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 SERPINB6P35237 376 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 HCAR3P49019 387 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 IRAK1P51617 712 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 GEMIN4P57678 1058 aaKnown RBP14.22□□□□□ -0.13
TRAF4-215ENST00000584944 TAS2R40P59535 323 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 GNA12Q03113 381 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 CSTF1Q05048 431 aaKnown RBP14.22□□□□□ -0.13
TRAF4-215ENST00000584944 STARD3Q14849 445 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 CA9Q16790 459 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 GEN1Q17RS7 908 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 C5orf22Q49AR2 442 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 HSF5Q4G112 596 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-215ENST00000584944 EOGTQ5NDL2 527 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 CCDC181Q5TID7 509 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 RETSATQ6NUM9 610 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 ZNF687Q8N1G0 1237 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 DCLK2Q8N568 766 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 CCDC33Q8N5R6 958 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 RTL3Q8N8U3 475 aaKnown RBP14.22□□□□□ -0.13
TRAF4-215ENST00000584944 NELL1Q92832 810 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 FEM1AQ9BSK4 669 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 ATP13A1Q9HD20 1204 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 TMEM248Q9NWD8 314 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 RCOR3Q9P2K3 495 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-215ENST00000584944 TRIM10Q9UDY6 481 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 CLEC4EQ9ULY5 219 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 TBC1D30Q9Y2I9 924 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 PCDHGA2Q9Y5H1 932 aa14.22□□□□□ -0.13
TRAF4-215ENST00000584944 GOLGA6L9A6NEM1 432 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 MIF4GDA9UHW6 222 aaKnown RBP14.21□□□□□ -0.13
TRAF4-215ENST00000584944 K7EQS6 105 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 DFFAO00273 331 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 ZRANB2O95218 330 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAF4-215ENST00000584944 DLDP09622 509 aaKnown RBP14.21□□□□□ -0.13
TRAF4-215ENST00000584944 CCR3P51677 355 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 ECT2LQ008S8 904 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 PLEKHG6Q3KR16 790 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 PARP15Q460N3 678 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 FUT11Q495W5 492 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 ACCSLQ4AC99 568 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 FSCBQ5H9T9 825 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 MANEALQ5VSG8 457 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 ZNF683Q8IZ20 524 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 SPEM1Q8N4L4 309 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 LZTR1Q8N653 840 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 ALLCQ8N6M5 410 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAF4-215ENST00000584944 ZBTB44Q8NCP5 570 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 WFDC5Q8TCV5 224 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 RBM41Q96IZ5 413 aaKnown RBP14.21□□□□□ -0.13
TRAF4-215ENST00000584944 CSPG4P5Q96PW8 444 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 HINFPQ9BQA5 517 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 ZNF670Q9BS34 389 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 MAGEB5Q9BZ81 275 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 MAGEH1Q9H213 219 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 GOLPH3Q9H4A6 298 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 PCDH18Q9HCL0 1135 aa14.21□□□□□ -0.13
TRAF4-215ENST00000584944 CWC15Q9P013 229 aaKnown RBP14.21□□□□□ -0.13
TRAF4-215ENST00000584944 A0A0A0MRY4 1105 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 GRID2IPA4D2P6 1211 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 ARHGAP42A6NI28 874 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 PRRT4C9JH25 899 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 KIF5CO60282 957 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 NEBLO76041 1014 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 ALDH1A2O94788 518 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 ERCC2P18074 760 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 MZF1P28698 734 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 NTSR1P30989 418 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 CXCL12P48061 93 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 NUMBP49757 651 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 DNA2P51530 1060 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 RWDD2BP57060 319 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 YBEYP58557 167 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 SEMA3BQ13214 749 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 TXNRD3NBQ6F5E7 133 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 CXorf57Q6NSI4 855 aaKnown RBP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 Q6ZS52 159 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 RFX6Q8HWS3 928 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 RCOR2Q8IZ40 523 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 PHTF2Q8N3S3 785 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 TXNDC5Q8NBS9 432 aaKnown RBP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 TRIM58Q8NG06 486 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 USP33Q8TEY7 942 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 CYB5D2Q8WUJ1 264 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 NSMCE1Q8WV22 266 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 UBE2Q2Q8WVN8 375 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 RNF25Q96BH1 459 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 CHRDQ9H2X0 955 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 POLMQ9NP87 494 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 PRMT8Q9NR22 394 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 ZSCAN32Q9NX65 697 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 TRMT1Q9NXH9 659 aaKnown RBP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 BCCIPQ9P287 314 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRAF4-215ENST00000584944 SALL4Q9UJQ4 1053 aa14.2□□□□□ -0.14
TRAF4-215ENST00000584944 COL4A2P08572 1712 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 LILRB5O75023 590 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 FTCDO95954 541 aa14.19□□□□□ -0.14
TRAF4-215ENST00000584944 EPHX1P07099 455 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms