RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 IGSF8Q969P0 613 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 WBP2Q969T9 261 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 ALKBH8Q96BT7 664 aaKnown RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 PHF21BQ96EK2 531 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 CHKBQ9Y259 395 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 FAM237BA0A1B0GVD1 139 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 NEMP2A6NFY4 417 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 C9JVG2 144 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 SCAMP1O15126 338 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 TRIM24O15164 1050 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 GALTP07902 379 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 NTHL1P78549 312 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 IRF9Q00978 393 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 PLIN5Q00G26 463 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
RFFL-212ENST00000584655 LRRC38Q5VT99 294 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 LRIG3Q6UXM1 1119 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 NUP93Q8N1F7 819 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 CCDC124Q96CT7 223 aaKnown RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 PRR11Q96HE9 360 aaPredicted RBP10.51□□□□□ -0.73
RFFL-212ENST00000584655 NPY6RQ99463 290 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 HAO1Q9UJM8 370 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
RFFL-212ENST00000584655 FAM107AO95990 144 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 PTPN3P26045 913 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 MSX2P35548 267 aaPredicted RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 BFSP2Q13515 415 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 MSL3Q8N5Y2 521 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 TTPALQ9BTX7 342 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 KLHL14Q9P2G3 628 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 PPARGC1AQ9UBK2 798 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 PHTF1Q9UMS5 762 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 TPP1O14773 563 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 DIAPH2O60879 1101 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 CDC25CP30307 473 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 EPHB1P54762 984 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 ZNF235Q14590 738 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 NT5DC4Q86YG4 428 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 NUDCD3Q8IVD9 361 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 DCP1BQ8IZD4 617 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 MREGQ8N565 214 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 DDI1Q8WTU0 396 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 MTG2Q9H4K7 406 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 WDR6Q9NNW5 1121 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 HCFC1R1Q9NWW0 138 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 HS3ST4Q9Y661 456 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 A0A0A0MRY4 1105 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 A0A1W2PRU2 124 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 SLC8A1P32418 973 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 GBP1P32455 592 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 USP10Q14694 798 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 FASTKD1Q53R41 847 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 ATXN7L2Q5T6C5 722 aaPredicted RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 RFWD2Q8NHY2 731 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 OXNAD1Q96HP4 312 aaPredicted RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 SPATA13Q96N96 652 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 SRPK1Q96SB4 655 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 FAM129AQ9BZQ8 928 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 TNKS2Q9H2K2 1166 aa10.5□□□□□ -0.73
RFFL-212ENST00000584655 CXXC1Q9P0U4 656 aaPredicted RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 AFF4Q9UHB7 1163 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 RUVBL2Q9Y230 463 aaKnown RBP10.5□□□□□ -0.73
RFFL-212ENST00000584655 WDR81Q562E7 1941 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 E9PAM4 449 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 K7ERQ8 282 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 KPNA6O60684 536 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 TNFRSF8P28908 595 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ALDH1A3P47895 512 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 SARNPP82979 210 aaKnown RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 RNF148Q8N7C7 305 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 HBEGFQ99075 208 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ACBD6Q9BR61 282 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 CD248Q9HCU0 757 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 CNGB3Q9NQW8 809 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 PRKAG2Q9UGJ0 569 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 FAM50BQ9Y247 325 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 RBBP6Q7Z6E9 1792 aaKnown RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 CELSR3Q9NYQ7 3312 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 H0Y626 953 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ALOX15BO15296 676 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 MAP2K2P36507 400 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 GABRB2P47870 512 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 SMAD3P84022 425 aaKnown RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 WASHC5Q12768 1159 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ITGA9Q13797 1035 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ZNF470Q6ECI4 717 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 FBXL22Q6P050 247 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 MTDHQ86UE4 582 aaKnown RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 C12orf50Q8NA57 414 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 ZSCAN18Q8TBC5 510 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 PPP4R1Q8TF05 950 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 FCRL3Q96P31 734 aaPredicted RBP10.49□□□□□ -0.73
RFFL-212ENST00000584655 SEMA3CQ99985 751 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 ENTPD7Q9NQZ7 604 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 FBXW11Q9UKB1 542 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 SHROOM3Q8TF72 1996 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 DNM1LO00429 736 aa10.49□□□□□ -0.73
RFFL-212ENST00000584655 SH3BGRLO75368 114 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms