RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 F5H5T6 163 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 M0QYV0 167 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 SLC16A3O15427 465 aaKnown RBP13.77□□□□□ -0.21
COPS3-218ENST00000584216 KLK10O43240 276 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 RTN2O75298 545 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 USP12O75317 370 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 ZNF18P17022 549 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 DGKAP23743 735 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 SYKP43405 635 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
COPS3-218ENST00000584216 KCNC4Q03721 635 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 VAC14Q08AM6 782 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 CNGA2Q16280 664 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 PMF1Q6P1K2 205 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 NEK5Q6P3R8 708 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 BEND5Q7L4P6 421 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 APCDD1Q8J025 514 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 SLC25A45Q8N413 288 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 FAM174AQ8TBP5 190 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 SNRNP27Q8WVK2 155 aaKnown RBP13.77□□□□□ -0.21
COPS3-218ENST00000584216 RNF34Q969K3 372 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 SLC39A13Q96H72 371 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 CPNE5Q9HCH3 593 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 NLGN3Q9NZ94 848 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 NCKIPSDQ9NZQ3 722 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 SLC12A6Q9UHW9 1150 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 SLC25A13Q9UJS0 675 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 PTPRQQ9UMZ3 2332 aa13.77□□□□□ -0.21
COPS3-218ENST00000584216 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
COPS3-218ENST00000584216 PIK3R2O00459 728 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 FFAR2O15552 330 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 CSO75390 466 aaKnown RBP13.76□□□□□ -0.21
COPS3-218ENST00000584216 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
COPS3-218ENST00000584216 THEGLP0DJG4 465 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 RBMS1P29558 406 aaKnown RBP13.76□□□□□ -0.21
COPS3-218ENST00000584216 AKT2P31751 481 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 STK19P49842 368 aaPredicted RBP13.76□□□□□ -0.21
COPS3-218ENST00000584216 KCNMA1Q12791 1236 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 DPYDQ12882 1025 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 ACCSLQ4AC99 568 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 CBWD6Q4V339 395 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 CBWD3Q5JTY5 395 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 RABGAP1LQ5R372 815 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 CBWD5Q5RIA9 395 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 AGBL4Q5VU57 503 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 IGF2-ASQ6U949 168 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 TMEM270Q6UE05 265 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 TMC6Q7Z403 805 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 FAM181AQ8N9Y4 354 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 ERCC4Q92889 916 aaPredicted RBP13.76□□□□□ -0.21
COPS3-218ENST00000584216 FAM149B1Q96BN6 582 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 MYEOVQ96EZ4 313 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 IFT43Q96FT9 208 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 CCDC114Q96M63 670 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 TSG101Q99816 390 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 MIS12Q9H081 205 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
COPS3-218ENST00000584216 A0A1B0GVM2 712 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 TCAF2A6NFQ2 919 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 PIAS2O75928 621 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 SLC2A3P11169 496 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 TACR2P21452 398 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 ACADSBP45954 432 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 PLK1P53350 603 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 DNM1Q05193 864 aaKnown RBP13.75□□□□□ -0.21
COPS3-218ENST00000584216 CNTN1Q12860 1018 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 MTA1Q13330 715 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 RAP1GAP2Q684P5 730 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 DCP2Q8IU60 420 aaKnown RBP13.75□□□□□ -0.21
COPS3-218ENST00000584216 ATP6V0D2Q8N8Y2 350 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 TMEM145Q8NBT3 493 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 MAPK15Q8TD08 544 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 CLEC4CQ8WTT0 213 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 FRS2Q8WU20 508 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 MED8Q96G25 268 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 PPM1HQ9ULR3 514 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 PCDHB4Q9Y5E5 795 aa13.75□□□□□ -0.21
COPS3-218ENST00000584216 MCF2LO15068 1137 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 ATP9BO43861 1147 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 LZTS3O60299 673 aaPredicted RBP13.74□□□□□ -0.21
COPS3-218ENST00000584216 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 VAV1P15498 845 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 HNRNPA2B1P22626 353 aaKnown RBP13.74□□□□□ -0.21
COPS3-218ENST00000584216 HNRNPKP61978 463 aaKnown RBP eCLIP13.74□□□□□ -0.21
COPS3-218ENST00000584216 CETN1Q12798 172 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 POM121L1PQ3SYA9 428 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 TAC4Q86UU9 113 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
COPS3-218ENST00000584216 UBR7Q8N806 425 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 TPCN2Q8NHX9 752 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 TFAP2BQ92481 460 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 TTC9Q92623 222 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 VCPIP1Q96JH7 1222 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 APOLD1Q96LR9 279 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
COPS3-218ENST00000584216 CALN1Q9BXU9 219 aa13.74□□□□□ -0.21
COPS3-218ENST00000584216 DYRK4Q9NR20 520 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms