RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	SIM1	P81133	766 aa	Predicted RBP	14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ELAVL3	Q14576	367 aa	Known RBP	14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	NCAPH	Q15003	741 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CDO1	Q16878	200 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ANO6	Q4KMQ2	910 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	KIAA0895L	Q68EN5	471 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	PIP4P1	Q86T03	277 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ALG14	Q96F25	216 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CAMK1G	Q96NX5	476 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	NAT10	Q9H0A0	1025 aa	Known RBP	14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	GAREM1	Q9H706	876 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	IL21R	Q9HBE5	538 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TM9SF3	Q9HD45	589 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TMEM63C	Q9P1W3	806 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D30	Q9Y2I9	924 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	FRY	Q5TBA9	3013 aa		14	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	NUMA1	Q14980	2115 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	LRRC72	A6NJI9	287 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	UPK3BL1	B0FP48	263 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	UPK3BL2	E5RIL1	263 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186		E9PAM4	449 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SH3BP5	O60239	455 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SNAP91	O60641	907 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	GJB6	O95452	261 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ADH1B	P00325	375 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ATP1A3	P13637	1013 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SPINK2	P20155	84 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C5AR1	P21730	350 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CD27	P26842	260 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	NSF	P46459	744 aa	Known RBP	13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	GALC	P54803	685 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	KRT83	P78385	493 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	BNC1	Q01954	994 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SLC14A1	Q13336	389 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TEAD4	Q15561	434 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	DLG2	Q15700	870 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	HLA-B	Q31612	363 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	POM121L1P	Q3SYA9	428 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C5orf22	Q49AR2	442 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	RAB6C	Q53S08	254 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	NCEH1	Q6PIU2	408 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	IL27RA	Q6UWB1	636 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	LAYN	Q6UX15	382 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TRIM72	Q6ZMU5	477 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186		Q6ZVU0	165 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ADAT2	Q7Z6V5	191 aa	Known RBP	13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ZNF683	Q8IZ20	524 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	AADAT	Q8N5Z0	425 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ATP11C	Q8NB49	1132 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	OR14C36	Q8NHC7	312 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C1orf216	Q8TAB5	229 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	FRS2	Q8WU20	508 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	RXFP2	Q8WXD0	754 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	OR8D1	Q8WZ84	308 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C1orf74	Q96LT6	269 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	PCDHB18P	Q96TA0	734 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	RAB6C	Q9H0N0	254 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	HSD3B7	Q9H2F3	369 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ADAM22	Q9P0K1	906 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	FZD4	Q9ULV1	537 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	DAAM1	Q9Y4D1	1078 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	OR51B4	Q9Y5P0	310 aa		13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ASCC3	Q8N3C0	2202 aa	Known RBP	13.99	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	DRGX	A6NNA5	263 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	PLK4	O00444	970 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ATP9B	O43861	1147 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	GJB3	O75712	270 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CER1	O95813	267 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TOP3B	O95985	862 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	IGHV4-34	P06331	123 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	UNG	P13051	313 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	GOT1	P17174	413 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	OR1E1	P30953	314 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SDC4	P31431	198 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	METAP1	P53582	386 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	FAM193A	P78312	1265 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	KIF19	Q2TAC6	998 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C6orf118	Q5T5N4	469 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CAVIN1	Q6NZI2	390 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	LINGO4	Q6UY18	593 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	APTX	Q7Z2E3	356 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	DSG4	Q86SJ6	1040 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SETD3	Q86TU7	594 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	NAXD	Q8IW45	347 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	OR2T34	Q8NGX1	318 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	JOSD2	Q8TAC2	188 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SETD7	Q8WTS6	366 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ERGIC2	Q96RQ1	377 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	HAPLN3	Q96S86	360 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SPON2	Q9BUD6	331 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TMEM51	Q9NW97	253 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ANKRD6	Q9Y2G4	727 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	PCDHB9	Q9Y5E1	797 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SNX11	Q9Y5W9	270 aa		13.98	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3D	A0A087WVF3	549 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3I	A0A087WXS9	549 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms